Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Erwinia amylovora ATCC 49946

Properties
Regulator type: Transcription factor
TF locus tag: EAM_3225
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Regulog: Crp - Enterobacteriales
Statistics of regulated genes:
- Genes 140
- Operons 73
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 2301 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -194
Score: 3.9
Sequence: TTTTGTTAAGCAGATCTCTTTT
Locus tag: EAM_2348
Name: fadL
Funciton: Long-chain fatty acid transport protein
fadL
Long-chain fatty acid transport protein

Position: -198
Score: 3.3
Sequence: TAAAGCGATCGGATTTAACAAT
Locus tag: EAM_0746
Name: pdhR
Funciton: Transcriptional repressor for pyruvate dehydrogenase complex
Locus tag: EAM_0747
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: EAM_0748
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
pdhR
Transcriptional repressor for pyruvate dehydrogenase complex
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)

Position: -37
Score: 5.3
Sequence: AAATGTGATCTAAATCACTTTT
Locus tag: EAM_3128
Name: aaeR
Funciton: LysR-family transcriptional regulator
aaeR
LysR-family transcriptional regulator

Position: -98
Score: 3.9
Sequence: CTGCGTGATCTGCCGCGCAAAA
Locus tag: EAM_0327
Name: acs
Funciton: acetyl-coenzyme A synthetase
Locus tag: EAM_0326
Name: yjcH
Funciton: membrane protein
Locus tag: EAM_0325
Name: actP
Funciton: acetate permease
acs
acetyl-coenzyme A synthetase
yjcH
membrane protein
actP
acetate permease

Position: -131
Score: 4.1
Sequence: ACATATGAAGGCCATCACATAA
Locus tag: EAM_1697
Name: araB
Funciton: L-ribulokinase
Locus tag: EAM_1696
Name: araA
Funciton: L-arabinose isomerase
araB
L-ribulokinase
araA
L-arabinose isomerase

Position: -251
Score: 4.3
Sequence: TTATGTGATGGCCTTCATATGT
Locus tag: EAM_1698
Name: araF
Funciton: L-arabinose-binding periplasmic protein
Locus tag: EAM_1699
Name: araG
Funciton: L-arabinose transporter ATP-binding protein
Locus tag: EAM_1700
Name: araH
Funciton: L-arabinose transporter permease protein
araF
L-arabinose-binding periplasmic protein
araG
L-arabinose transporter ATP-binding protein
araH
L-arabinose transporter permease protein

Position: -66
Score: 3.8
Sequence: TATTGTATTTTTATTCACTATT
Locus tag: EAM_0137
Name: argE
Funciton: acetylornithine deacetylase
argE
acetylornithine deacetylase

Position: -91
Score: 3.8
Sequence: ATTTGCAATTTGCATAAAAATT
Locus tag: EAM_3122
Name: argR
Funciton: arginine repressor
EAM_3122
argR
arginine repressor

Position: -228
Score: 4.2
Sequence: CAATGTGACCTGGAACAGATAT
Locus tag: EAM_0416
Name: aspA
Funciton: aspartate ammonia-lyase
Locus tag: EAM_0415
Name: dcuA
Funciton: anaerobic C-4-dicarboxylate symporter
aspA
aspartate ammonia-lyase
dcuA
anaerobic C-4-dicarboxylate symporter

Position: -69
Score: 4.3
Sequence: ATTTTTAACCTTCATCACACTT
Locus tag: EAM_1606
Name: astC
Funciton: bifunctional succinylornithine transaminase/acetylornithine transaminase
Locus tag: EAM_1607
Name: astA
Funciton: arginine succinyltransferase
Locus tag: EAM_1608
Name: astD
Funciton: succinylglutamic semialdehyde dehydrogenase
Locus tag: EAM_1609
Name: astB
Funciton: succinylarginine dihydrolase
Locus tag: EAM_1610
Name: astE
Funciton: succinylglutamate desuccinylase
astC
bifunctional succinylornithine transaminase/acetylornithine transaminase
astA
arginine succinyltransferase
astD
succinylglutamic semialdehyde dehydrogenase
astB
succinylarginine dihydrolase
astE
succinylglutamate desuccinylase

Position: -264
Score: 4.4
Sequence: ATTTGTGATCGTGGACACGCTT
Locus tag: EAM_3481
Name: atpI
Funciton: ATP synthase subunit I
Locus tag: EAM_3480
Name: atpB
Funciton: ATP synthase subunit A
Locus tag: EAM_3479
Name: atpE
Funciton: ATP synthase subunit C
Locus tag: EAM_3478
Name: atpF
Funciton: ATP synthase subunit B
Locus tag: EAM_3477
Name: atpH
Funciton: ATP synthase subunit D
Locus tag: EAM_3476
Name: atpA
Funciton: ATP synthase subunit A
Locus tag: EAM_3475
Name: atpG
Funciton: ATP synthase subunit C
Locus tag: EAM_3474
Name: atpD
Funciton: ATP synthase subunit B
Locus tag: EAM_3473
Name: atpC
Funciton: ATP synthase epsilon subunit
atpI
ATP synthase subunit I
atpB
ATP synthase subunit A
atpE
ATP synthase subunit C
atpF
ATP synthase subunit B
atpH
ATP synthase subunit D
atpA
ATP synthase subunit A
atpG
ATP synthase subunit C
atpD
ATP synthase subunit B
atpC
ATP synthase epsilon subunit

Position: -129
Score: 3.8
Sequence: TGATGTAATGAGCAACAAATAA
Position: -101
Score: 4.4
Sequence: AAGTTTGATGTGGCTAAAATTA
Locus tag: EAM_2082
Name: yedJ
Funciton: hypothetical protein
yedJ
hypothetical protein

Position: -124
Score: 3.9
Sequence: ACTTGCGATAAGTCTCTCATTT
Position: -104
Score: 4.1
Sequence: TTTGGTGATGCATTTCATTTAT
Position: -74
Score: 4.7
Sequence: TAGAGCGATTTAGATCACATAT
Locus tag: EAM_2202
Name: cdd
Funciton: cytidine deaminase
cdd
cytidine deaminase

Position: -161
Score: 4
Sequence: AAATTTGAAGCAGTTAACGCTA
Position: -132
Score: 4.5
Sequence: TTTTGTGATAGAGGTCGCTATT
Locus tag: EAM_1320
Name: clpS
Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: EAM_1321
Name: clpA
Funciton: ATP-dependent CLP protease ATP-binding subunit
clpS
ATP-dependent Clp protease adaptor protein
clpA
ATP-dependent CLP protease ATP-binding subunit

Position: -75
Score: 4.4
Sequence: TCGTGTGATCTGCGCCACATTA
Locus tag: EAM_0727
Name: coaE
Funciton: dephospho-CoA kinase
Locus tag: EAM_0726
Name: yacF
Funciton: hypothetical protein
Locus tag: EAM_0725
Name: yacG
Funciton: zinc-binding protein
coaE
dephospho-CoA kinase
yacF
hypothetical protein
yacG
zinc-binding protein

Position: -113
Score: 3.6
Sequence: AAAAACGATATTTATCACTTTT
Locus tag: EAM_1116
Name: cspE
Funciton: cold shock protein E
cspE
cold shock protein E

Position: -134
Score: 4
Sequence: AGTTGTGACAGCGTTTGCAAAA
Locus tag: EAM_0985
Name: cyoA
Funciton: cytochrome o ubiquinol oxidase subunit II
Locus tag: EAM_0984
Name: cyoB
Funciton: cytochrome o ubiquinol oxidase subunit I
Locus tag: EAM_0983
Name: cyoC
Funciton: cytochrome o ubiquinol oxidase subunit III
Locus tag: EAM_0982
Name: cyoD
Funciton: cytochrome o ubiquinol oxidase subunit IV
Locus tag: EAM_0981
Name: cyoE
Funciton: protoheme IX farnesyltransferase
cyoA
cytochrome o ubiquinol oxidase subunit II
cyoB
cytochrome o ubiquinol oxidase subunit I
cyoC
cytochrome o ubiquinol oxidase subunit III
cyoD
cytochrome o ubiquinol oxidase subunit IV
cyoE
protoheme IX farnesyltransferase

Position: -158
Score: 4.2
Sequence: AAATGTGACACAGCACGAATAA
Locus tag: EAM_0455
Name: cysQ
Funciton: PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase
cysQ
PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase

Position: -134
Score: 4.4
Sequence: TGAAGTGATTCAGCTCATAAAA
Locus tag: EAM_3380
Name: dctA
Funciton: C4-dicarboxylate transport protein
dctA
C4-dicarboxylate transport protein

Position: -99
Score: 4.8
Sequence: TAATTTGAGCCGGTTCACACTT
Locus tag: EAM_3065
Name: deaD
Funciton: ATP-independent RNA helicase
deaD
ATP-independent RNA helicase

Position: -233
Score: 4.6
Sequence: TGATGTGATAATTCTAACATTA
Locus tag: EAM_0615
Name: deoC
Funciton: 2-deoxyribose-5-phosphate aldolase
Locus tag: EAM_0616
Name: deoA
Funciton: thymidine phosphorylase
Locus tag: EAM_0617
Name: deoB
Funciton: phosphopentomutase
Locus tag: EAM_0618
Name: deoD
Funciton: purine nucleoside phosphorylase
deoC
2-deoxyribose-5-phosphate aldolase
deoA
thymidine phosphorylase
deoB
phosphopentomutase
deoD
purine nucleoside phosphorylase

Position: -103
Score: 3.4
Sequence: TTTTGTGACCTGCCTTAAAAGC
Locus tag: EAM_2496
Name: csiE
Funciton: Stationary phase inducible protein CsiE
csiE
Stationary phase inducible protein CsiE

Position: -219
Score: 4
Sequence: TATTGTTAACTTGCTCACAAGA
Locus tag: EAM_3146
Name: dusB
Funciton: tRNA-dihydrouridine synthase B
Locus tag: EAM_3147
Name: fis
Funciton: DNA-binding protein Fis
dusB
tRNA-dihydrouridine synthase B
fis
DNA-binding protein Fis

Position: -208
Score: 4.1
Sequence: TTTTGTGACGCAGATCGAAAGT
Locus tag: EAM_2813
Name: epd
Funciton: D-erythrose 4-phosphate dehydrogenase
Locus tag: EAM_2812
Name: pgk
Funciton: phosphoglycerate kinase
epd
D-erythrose 4-phosphate dehydrogenase
pgk
phosphoglycerate kinase

Position: -164
Score: 3.6
Sequence: AATTGTTATCATCTTATCACAG
Position: -116
Score: 4
Sequence: AGTTGTGAACCTGCCCGCAAAT
Locus tag: EAM_0213
Name: fadB
Funciton: 4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase
EAM_0213
fadB
4-enzyme protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; enoyl-CoA hydratase

Position: -130
Score: 3.9
Sequence: TTTAGTGATGCGCTTCGCAACC
Locus tag: EAM_1956
Name: fadD
Funciton: long-chain-fatty-acid--CoA ligase
Locus tag: EAM_1955
Name: rnd
Funciton: ribonuclease D
fadD
long-chain-fatty-acid--CoA ligase
rnd
ribonuclease D

Position: -169
Score: 3.8
Sequence: AACCGTGACTGAGATCGCTAAA
Locus tag: EAM_0507
Name: fadH
Funciton: 2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase)
fadH
2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase)

Position: -179
Score: 4.4
Sequence: AAATGTGCTGGCTGTCAAAAAT
Locus tag: EAM_2223
Name: fruB
Funciton: PTS system, fructose-specific IIA/FPr component
Locus tag: EAM_2222
Name: fruK
Funciton: 1-phosphofructokinase
Locus tag: EAM_2221
Name: fruA
Funciton: PTS system, fructose-specific IIBC component
fruB
PTS system, fructose-specific IIA/FPr component
fruK
1-phosphofructokinase
fruA
PTS system, fructose-specific IIBC component

Position: -161
Score: 3.9
Sequence: ATATCTGTTCCAGGTCACATTG
Locus tag: EAM_0417
Name: fxsA
Funciton: suppressor of F plamsid exlusion of phage T7
fxsA
suppressor of F plamsid exlusion of phage T7

Position: -152
Score: 4.1
Sequence: TCATGTGATCTGTCGCACAGTC
Locus tag: EAM_2827
Name: galP
Funciton: sugar transporter
galP
sugar transporter

Position: -215
Score: 5.4
Sequence: AATTGTGATGCAGATCACCATT
Locus tag: EAM_1931
Name: gapA
Funciton: glyceraldehyde-3-phosphate dehydrogenase
Locus tag: EAM_1932
Name: yeaD
Funciton: Aldose 1-epimerase
gapA
glyceraldehyde-3-phosphate dehydrogenase
yeaD
Aldose 1-epimerase

Position: -124
Score: 4
Sequence: AGACGTTATCGGCATCACGCAT
Locus tag: EAM_3265
Name: glpD
Funciton: glycerol-3-phosphate dehydrogenase
glpD
glycerol-3-phosphate dehydrogenase

Position: -134
Score: 3.9
Sequence: ATGCGTGATGCCGATAACGTCT
Locus tag: EAM_3264
Name: glpE
Funciton: thiosulfate sulfurtransferase
Locus tag: EAM_3263
Name: glpG
Funciton: predicted intramembrane serine protease
Locus tag: EAM_3262
Name: glpR2
Funciton: DNA-binding transcriptional repressor
glpE
thiosulfate sulfurtransferase
glpG
predicted intramembrane serine protease
glpR2
DNA-binding transcriptional repressor

Position: -146
Score: 4.1
Sequence: TTTCATGACGCGGTACACATTT
Locus tag: EAM_0119
Name: glpF
Funciton: facilitator for glycerol uptake
Locus tag: EAM_0118
Name: glpK
Funciton: glycerol kinase
glpF
facilitator for glycerol uptake
glpK
glycerol kinase

Position: -240
Score: 3.7
Sequence: AAACGCGATGCGGTTAACGATG
Position: -147
Score: 3.7
Sequence: ATTTGTGCCTCTCTTCACGGTC
Locus tag: EAM_0195
Name: glpT
Funciton: glycerol-3-phosphate transporter
glpT
glycerol-3-phosphate transporter

Position: -129
Score: 4.6
Sequence: TTTTTTGACAGTCTTCACACTT
Locus tag: EAM_3275
Name: gntK
Funciton: gluconate kinase 1
Locus tag: EAM_3274
Name: gntU
Funciton: Low-affinity gluconate transporter (Gluconate permease)
gntK
gluconate kinase 1
gntU
Low-affinity gluconate transporter (Gluconate permease)

Position: -121
Score: 3.8
Sequence: TTTTGTGACAAAGCTGGCACAA
Locus tag: EAM_1254
Name: hutH
Funciton: histidine ammonia-lyase
Locus tag: EAM_1253
Name: hutU
Funciton: urocanate hydratase
hutH
histidine ammonia-lyase
hutU
urocanate hydratase

Position: -94
Score: 3.8
Sequence: TGTTGCGATAGCCATCACATCC
Locus tag: EAM_0926
Name: lacZ
Funciton: beta-D-galactosidase
lacZ
beta-D-galactosidase

Position: -56
Score: 3.6
Sequence: TTGTGTAATACTTGTAACGCTA
Locus tag: EAM_1656
Name: lpp
Funciton: major outer membrane lipoprotein
lpp
major outer membrane lipoprotein

Position: -54
Score: 3.9
Sequence: TAAGGTGTTTGTGCTCACCTTT
Locus tag: EAM_3261
Name: malP
Funciton: maltodextrin phosphorylase
Locus tag: EAM_3260
Name: malQ
Funciton: 4-alpha-glucanotransferase
malP
maltodextrin phosphorylase
malQ
4-alpha-glucanotransferase

Position: -195
Score: 4.9
Sequence: ATATGTGATTAAAGTCACCTTA
Locus tag: EAM_1147
Name: nagB
Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: EAM_1146
Name: nagA
Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: EAM_1145
Name: nagC
Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: EAM_1144
Name: nagD
Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
nagB
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
nagA
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
nagC
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
nagD
Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem

Position: -161
Score: 4.8
Sequence: TAAGGTGACTTTAATCACATAT
Locus tag: EAM_1148
Name: nagE
Funciton: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
nagE
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)

Position: -55
Score: 3.7
Sequence: TAAGGTTATTTTATTAACCTTT
Locus tag: EAM_1473
Name: ndh
Funciton: NADH dehydrogenase (EC 1.6.99.3)
ndh
NADH dehydrogenase (EC 1.6.99.3)

Position: -153
Score: 5
Sequence: TAACGTGATCTAAATCACTTTT
Locus tag: EAM_3229
Name: ppiA
Funciton: Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)
ppiA
Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)

Position: -162
Score: 4.6
Sequence: AAACGTGATAGCCATCAAACAA
Locus tag: EAM_1466
Name: ptsG
Funciton: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)
ptsG
PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69)

Position: -300
Score: 3.6
Sequence: ATTTGTTAAAAATCGCAAAAAA
Position: -180
Score: 3.9
Sequence: AAATGTGATTCCGATCACCGGC
Locus tag: EAM_1294
Name: sdaC
Funciton: Serine transporter
sdaC
Serine transporter

Position: -249
Score: 4.4
Sequence: AAGTGTGATTTTTGTCACTGTT
Position: -190
Score: 3.6
Sequence: TAATGAGATTGTGATCCACTTA
Locus tag: EAM_1168
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: EAM_1169
Name: sdhD
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: EAM_1170
Name: sdhA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: EAM_1171
Name: sdhB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
sdhD
Succinate dehydrogenase hydrophobic membrane anchor protein
sdhA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
sdhB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)

Position: -128
Score: 5.3
Sequence: AATTGTTATCTGCTTCACATTA
Locus tag: EAM_0744
Name: araT
Funciton: putative permease of the Na+:galactoside symporter family
Locus tag: EAM_0743
Name: abfA
Funciton: Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55)
araT
putative permease of the Na+:galactoside symporter family
abfA
Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55)

Position: -156
Score: 3.8
Sequence: TGATGTGAGTTGTCTCGCTTTG
Locus tag: EAM_0469
Name: CKO_03591
Funciton: hypothetical protein
Locus tag: EAM_0470
Name: CKO_03590
Funciton: putative cytoplasmic protein
Locus tag: EAM_0471
Name: CKO_03589
Funciton: putative cytoplasmic protein
Locus tag: EAM_0472
Name: CKO_03588
Funciton: putative inner membrane protein
Locus tag: EAM_0473
Name: CKO_03587
Funciton: putative inner membrane protein
Locus tag: EAM_0474
Name: CKO_03586
Funciton: dihydroorotase
Locus tag: EAM_0475
Name: CKO_03585
Funciton: hypothetical protein
Locus tag: EAM_0476
Name: CKO_03584
Funciton: hypothetical protein
CKO_03591
hypothetical protein
CKO_03590
putative cytoplasmic protein
CKO_03589
putative cytoplasmic protein
CKO_03588
putative inner membrane protein
CKO_03587
putative inner membrane protein
CKO_03586
dihydroorotase
CKO_03585
hypothetical protein
CKO_03584
hypothetical protein

Position: -218
Score: 5.3
Sequence: ATTTGTGATAAAAATCACACTT
Locus tag: EAM_2589
Name: tsx
Funciton: Nucleoside-specific channel-forming protein Tsx precursor
tsx
Nucleoside-specific channel-forming protein Tsx precursor

Position: -143
Score: 4.6
Sequence: AATTGCGACTTGTATCACCTTT
Position: -90
Score: 4
Sequence: ATTAAGGATGTTCATCACATAA
Locus tag: EAM_0200
Name: udp
Funciton: Uridine phosphorylase (EC 2.4.2.3)
udp
Uridine phosphorylase (EC 2.4.2.3)

Position: -92
Score: 4.3
Sequence: TATTTTGATATATAGCGAATTT
Locus tag: EAM_1217
Name: ybhK
Funciton: hypothetical protein
EAM_1217
ybhK
hypothetical protein

Position: -158
Score: 3.8
Sequence: AAAGATGATGCAGATCATCAAT
Locus tag: EAM_1899
Name: ychE
Funciton: putative channel protein
ychE
putative channel protein

Position: -97
Score: 3.9
Sequence: AAATGTGATCGCTGACTCATCA
Locus tag: EAM_1581
Name: ychH
Funciton: membrane protein
ychH
membrane protein

Position: -145
Score: 3.9
Sequence: AAATGTTATTTTGTTATCATCT
Locus tag: EAM_1665
Name: ydhD
Funciton: hypothetical protein
ydhD
hypothetical protein

Position: -137
Score: 5.2
Sequence: AATGGTGATCTGCATCACAATT
Locus tag: EAM_1930
Name: msrB
Funciton: methionine sulfoxide reductase B
Locus tag: EAM_1929
Name: b1777
Funciton: conserved hypothetical protein
msrB
methionine sulfoxide reductase B
b1777
conserved hypothetical protein

Position: -177
Score: 3.6
Sequence: AAATGAGCATTACTTCTCAAAA
Locus tag: EAM_2233
Name: yejG
Funciton: hypothetical protein
yejG
hypothetical protein

Position: -44
Score: 4
Sequence: TTGTGTGTTTTTTTTAAAATTT
Locus tag: EAM_2300
Name: yfbV
Funciton: putative cytoplasmic protein
yfbV
putative cytoplasmic protein

Position: -33
Score: 3.7
Sequence: TTAATTTATTGAATTCATATAT
Locus tag: EAM_2384
Name: yfeR
Funciton: transcriptional regulator, LysR family
yfeR
transcriptional regulator, LysR family

Position: -83
Score: 5.2
Sequence: AAATGTGATTTCAATCACGATT
Locus tag: EAM_2617
Name: raiA
Funciton: stationary phase translation inhibitor and ribosome stability factor
raiA
stationary phase translation inhibitor and ribosome stability factor

Position: -238
Score: 4.5
Sequence: ATTAGTGATAAACTTCACATCA
Locus tag: EAM_1104
Name: ygbI
Funciton: Hypothetical transcriptional regulator ygbI
ygbI
Hypothetical transcriptional regulator ygbI

Position: -90
Score: 4.4
Sequence: TGATGTGAAGTTTATCACTAAT
Locus tag: EAM_1106
Name: ygbJ
Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: EAM_1107
Name: ygbK
Funciton: hypothetical protein
ygbJ
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
ygbK
hypothetical protein

Position: -38
Score: 3.6
Sequence: GATTTTTACGCAGATCGCAATT
Locus tag: EAM_3109
Name: mtgA
Funciton: monofunctional biosynthetic peptidoglycan transglycosylase
mtgA
monofunctional biosynthetic peptidoglycan transglycosylase

Position: -134
Score: 3.6
Sequence: AAATATGCCGTATTGAACATTA
Locus tag: EAM_3376
Name: yhjE
Funciton: Inner membrane metabolite transport protein YhjE
yhjE
Inner membrane metabolite transport protein YhjE

Position: -143
Score: 4.9
Sequence: TTATGTGCTGTAAATCACATTC
Locus tag: EAM_1710
Name: mlc
Funciton: ROK family transcriptional regulatory protein
mlc
ROK family transcriptional regulatory protein

Position: -258
Score: 4.1
Sequence: TAATTTGATTATCATCAAGCAT
Locus tag: EAM_2679
Name: rpoS
Funciton: RNA polymerase sigma factor RpoS
rpoS
RNA polymerase sigma factor RpoS

Position: -174
Score: 4.6
Sequence: ACATGTGATGAAGATCAAACTT
Locus tag: EAM_2465
Name: guaB
Funciton: inosine-5'-monophosphate dehydrogenase
Locus tag: EAM_2464
Name: guaA
Funciton: bifunctional GMP synthase/glutamine amidotransferase protein
guaB
inosine-5'-monophosphate dehydrogenase
guaA
bifunctional GMP synthase/glutamine amidotransferase protein

Position: -223
Score: 3.9
Sequence: ATTGATGATCTGCATCATCTTT
Locus tag: EAM_1900
Name: adhE
Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
adhE
Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)

Position: -110
Score: 3.4
Sequence: GGCTGTGAGGTTTCTCACGTAG
Locus tag: EAM_2208
Name: galS
Funciton: Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator
galS
Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator

Position: -213
Score: 3.2
Sequence: AATAGCGATTTAAGGCAAACTC
Locus tag: EAM_0995
Name: hupB
Funciton: HU, DNA-binding transcriptional regulator, beta subunit
hupB
HU, DNA-binding transcriptional regulator, beta subunit

Position: -121
Score: 3.5
Sequence: AATAGTGAATAAAAATACAATA
Locus tag: EAM_0138
Name: argB
Funciton: Acetylglutamate kinase (EC 2.7.2.8)
Locus tag: EAM_0139
Name: argG
Funciton: Argininosuccinate synthase (EC 6.3.4.5)
Locus tag: EAM_0140
Name: argH
Funciton: Argininosuccinate lyase (EC 4.3.2.1)
argB
Acetylglutamate kinase (EC 2.7.2.8)
argG
Argininosuccinate synthase (EC 6.3.4.5)
argH
Argininosuccinate lyase (EC 4.3.2.1)

Position: -171
Score: 3.9
Sequence: GTGTGTGATGCCGTTAACACAG
Locus tag: EAM_3285
Name: ugpB
Funciton: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
Locus tag: EAM_3284
Name: ugpA
Funciton: SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3)
Locus tag: EAM_3283
Name: ugpE
Funciton: SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3)
Locus tag: EAM_3282
Name: ugpC
Funciton: SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3)
Locus tag: EAM_3281
Name: ugpQ
Funciton: Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
ugpB
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
ugpA
SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3)
ugpE
SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3)
ugpC
SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3)
ugpQ
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)

Position: -229
Score: 3.3
Sequence: CATTGCGAATATCTTTACACTT
Position: -210
Score: 3.9
Sequence: CTTCGTGACTCATGTCACTAAA
Position: -166
Score: 4.8
Sequence: TTAAGTGACCCGCATCACACTT
Position: -95
Score: 3.2
Sequence: CGTTTTGATCGTGATCCCTCAA
Position: -34
Score: 3.5
Sequence: ACATGAGATTTGCATCATTAAT
Locus tag: EAM_3416
Name: mtlA
Funciton: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Locus tag: EAM_3417
Name: mtlD
Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
Locus tag: EAM_3418
Name: mtlR
Funciton: Mannitol operon repressor
mtlA
PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69)
mtlD
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
mtlR
Mannitol operon repressor
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Regulatory Sites [ FASTA format ] DOWNLOAD