Regulon of Crp in Edwardsiella tarda EIB202
| Regulator type: | Transcription factor |
| TF locus tag: | ETAE_3299 |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Regulog: | Crp - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 169 |
| - Operons | 93 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By TF family - CRP
- By effector - Cyclic 3',5'-AMP
- By pathway - Carbon catabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -54
Score: 3.5 Sequence: TAGTTTGAGCAGGATCGCTGTA
Locus tag: ETAE_2873
Name: rpoS Funciton: RNA polymerase sigma factor RpoS |
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rpoS
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RNA polymerase sigma factor RpoS
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Position: -131
Score: 4.5 Sequence: ATCTGTGACGCAAATCACTTTT
Locus tag: ETAE_3129
Name: aaeR Funciton: LysR-family transcriptional regulator |
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aaeR
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LysR-family transcriptional regulator
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Position: -97
Score: 4.4 Sequence: TTACGTGATCGTGCGCGCAAAA
Locus tag: ETAE_0188
Name: acs Funciton: acetyl-coenzyme A synthetase |
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acs
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acetyl-coenzyme A synthetase
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Position: -265
Score: 5 Sequence: TTTCGTGACCTTAATCACAAAA
Locus tag: ETAE_1508
Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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adhE
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Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
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Position: -150
Score: 5 Sequence: TTTTGTGATGAATGTCACGTAT
Position: -98
Score: 3.7 Sequence: AACATAGATCATGATCACATTA
Locus tag: ETAE_3469
Name: aphA Funciton: acid phosphatase/phosphotransferase |
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aphA
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acid phosphatase/phosphotransferase
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Position: -65
Score: 3.9 Sequence: TATTGTATTTTTATTCATAATT
Locus tag: ETAE_3483
Name: argE Funciton: acetylornithine deacetylase |
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argE
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acetylornithine deacetylase
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Position: -48
Score: 3.8 Sequence: TAACGTTTTATACATAACAAAA
Locus tag: ETAE_2951
Name: iciA Funciton: chromosome replication initiation inhibitor protein |
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iciA
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chromosome replication initiation inhibitor protein
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Position: -117
Score: 3.8 Sequence: ATGTACGATATTGTTTACATAT
Locus tag: ETAE_2837
Name: aroF Funciton: phospho-2-dehydro-3-deoxyheptonate aldolase
Locus tag: ETAE_2836
Name: tyrA Funciton: T-protein [includes: chorismate mutase and prephenate dehydrogenase] |
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aroF
|
phospho-2-dehydro-3-deoxyheptonate aldolase
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tyrA
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T-protein [includes: chorismate mutase and prephenate dehydrogenase]
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Position: -63
Score: 4 Sequence: TATCGTGATCCCCATCACTTCC
Locus tag: ETAE_1792
Name: aroH Funciton: phospho-2-dehydro-3-deoxyheptonate aldolase |
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aroH
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phospho-2-dehydro-3-deoxyheptonate aldolase
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Position: -197
Score: 4.4 Sequence: ATCTGTGAGTATTATCACAGAT
Locus tag: ETAE_0311
Name: aspA Funciton: aspartate ammonia-lyase
Locus tag: ETAE_0310
Name: dcuA Funciton: anaerobic C-4-dicarboxylate symporter |
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aspA
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aspartate ammonia-lyase
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dcuA
|
anaerobic C-4-dicarboxylate symporter
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Position: -297
Score: 3.7 Sequence: AATCGTGAAAATATTTAAATTA
Locus tag: ETAE_3526
Name: atpI Funciton: ATP synthase subunit I
Locus tag: ETAE_3527
Name: atpB Funciton: ATP synthase subunit A
Locus tag: ETAE_3528
Name: atpE Funciton: ATP synthase subunit C
Locus tag: ETAE_3529
Name: atpF Funciton: ATP synthase subunit B
Locus tag: ETAE_3530
Name: atpH Funciton: ATP synthase subunit D
Locus tag: ETAE_3531
Name: atpA Funciton: ATP synthase subunit A
Locus tag: ETAE_3532
Name: atpG Funciton: ATP synthase subunit C
Locus tag: ETAE_3533
Name: atpD Funciton: ATP synthase subunit B
Locus tag: ETAE_3534
Name: atpC Funciton: ATP synthase epsilon subunit |
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atpI
|
ATP synthase subunit I
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atpB
|
ATP synthase subunit A
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atpE
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ATP synthase subunit C
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atpF
|
ATP synthase subunit B
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atpH
|
ATP synthase subunit D
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atpA
|
ATP synthase subunit A
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atpG
|
ATP synthase subunit C
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atpD
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ATP synthase subunit B
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atpC
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ATP synthase epsilon subunit
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Position: -76
Score: 4.9 Sequence: AAAAGTGATTATTATCACAAAT
Locus tag: ETAE_1162
Name: cdd Funciton: cytidine deaminase |
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cdd
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cytidine deaminase
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Position: -264
Score: 4.2 Sequence: AATTGTGCGCTATGTCTCACTA
Locus tag: ETAE_1836
Name: cfa Funciton: cyclopropane fatty acyl phospholipid synthase |
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cfa
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cyclopropane fatty acyl phospholipid synthase
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Position: -164
Score: 3.8 Sequence: AAGTTTGAGGCAGTTAACGCAA
Position: -144
Score: 3.6 Sequence: AATTGTGCGGCAGTGCGCTTTT
Locus tag: ETAE_2208
Name: clpS Funciton: ATP-dependent Clp protease adaptor protein
Locus tag: ETAE_2207
Name: clpA Funciton: ATP-dependent CLP protease ATP-binding subunit |
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clpS
|
ATP-dependent Clp protease adaptor protein
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clpA
|
ATP-dependent CLP protease ATP-binding subunit
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Position: -272
Score: 4 Sequence: AAATGTGATCATACAAACGATT
Locus tag: ETAE_0650
Name: coaE Funciton: dephospho-CoA kinase
Locus tag: ETAE_0649
Name: yacF Funciton: hypothetical protein
Locus tag: ETAE_0648
Name: yacG Funciton: zinc-binding protein |
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coaE
|
dephospho-CoA kinase
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yacF
|
hypothetical protein
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yacG
|
zinc-binding protein
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Position: -222
Score: 3.6 Sequence: TATTGTTATATTTGTTATCTTT
Locus tag: ETAE_2580
Name: cydA Funciton: cytochrome d terminal oxidase, polypeptide subunit I
Locus tag: ETAE_2579
Name: cydB Funciton: cytochrome D ubiquinol oxidase subunit II
Locus tag: ETAE_2578
Name: ybgE Funciton: hypothetical protein |
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cydA
|
cytochrome d terminal oxidase, polypeptide subunit I
|
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cydB
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cytochrome D ubiquinol oxidase subunit II
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ybgE
|
hypothetical protein
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Position: -258
Score: 4.2 Sequence: AAGTGCGATCGGGATCGAAAAA
Position: -175
Score: 3.6 Sequence: ATATGTGATCATATACTCATCG
Locus tag: ETAE_3434
Name: cytR Funciton: transcriptional repressor |
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cytR
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transcriptional repressor
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Position: -155
Score: 3.6 Sequence: TTATGCGTTTCAGCTCATAGAA
Locus tag: ETAE_3379
Name: dctA Funciton: C4-dicarboxylate transport protein |
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dctA
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C4-dicarboxylate transport protein
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Position: -96
Score: 4.8 Sequence: TAATTTGAGCCGGTTCACACTT
Locus tag: ETAE_0411
Name: deaD Funciton: ATP-independent RNA helicase |
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deaD
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ATP-independent RNA helicase
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Position: -233
Score: 4.9 Sequence: AATTGTGATGCAATGCACGTTT
Locus tag: ETAE_2958
Name: epd Funciton: D-erythrose 4-phosphate dehydrogenase
Locus tag: ETAE_2957
Name: pgk Funciton: phosphoglycerate kinase |
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epd
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D-erythrose 4-phosphate dehydrogenase
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pgk
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phosphoglycerate kinase
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Position: -70
Score: 5 Sequence: TTATGTGAGTGCTATCACAATA
Locus tag: ETAE_1900
Name: CKO_01286 Funciton: hypothetical protein |
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CKO_01286
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hypothetical protein
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Position: -150
Score: 3.9 Sequence: TGCATTGATTTAGTTCACATTC
Locus tag: ETAE_0381
Name: fbp Funciton: fructose-1,6-bisphosphatase |
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fbp
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fructose-1,6-bisphosphatase
|
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Position: -258
Score: 3.7 Sequence: ATTGGTGATCTATGTATTATTT
Locus tag: ETAE_2666
Name: fixA Funciton: electron transfer flavoprotein, beta subunit
Locus tag: ETAE_2667
Name: fixB Funciton: electron transfer flavoprotein, alpha subunit
Locus tag: ETAE_2668
Name: fixC Funciton: oxidoreductase
Locus tag: ETAE_2669
Name: fixX Funciton: ferredoxin-like protein
Locus tag: ETAE_2670
Name: yaaU Funciton: transport protein |
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fixA
|
electron transfer flavoprotein, beta subunit
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fixB
|
electron transfer flavoprotein, alpha subunit
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fixC
|
oxidoreductase
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fixX
|
ferredoxin-like protein
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yaaU
|
transport protein
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Position: -122
Score: 4 Sequence: CGTTATGCTCCATTTCACATTA
Locus tag: ETAE_1336
Name: flhD Funciton: DNA-binding transcriptional dual regulator with FlhC
Locus tag: ETAE_1337
Name: flhC Funciton: DNA-binding transcriptional dual regulator with FlhD |
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flhD
|
DNA-binding transcriptional dual regulator with FlhC
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flhC
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DNA-binding transcriptional dual regulator with FlhD
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Position: -199
Score: 4.1 Sequence: AAATGTGCTGAAGGTCTAAAAT
Locus tag: ETAE_2303
Name: fruB Funciton: PTS system, fructose-specific IIA/FPr component
Locus tag: ETAE_2302
Name: fruK Funciton: 1-phosphofructokinase
Locus tag: ETAE_2301
Name: fruA Funciton: PTS system, fructose-specific IIBC component |
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fruB
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PTS system, fructose-specific IIA/FPr component
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fruK
|
1-phosphofructokinase
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fruA
|
PTS system, fructose-specific IIBC component
|
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Position: -175
Score: 4.2 Sequence: AGTCTTGATGACGGTCACAAAA
Locus tag: ETAE_0293
Name: fucA Funciton: L-fuculose phosphate aldolase
Locus tag: ETAE_0294
Name: fucO Funciton: L-1,2-propanediol oxidoreductase |
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fucA
|
L-fuculose phosphate aldolase
|
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fucO
|
L-1,2-propanediol oxidoreductase
|
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Position: -189
Score: 4.6 Sequence: ATCTGTGATAATACTCACAGAT
Locus tag: ETAE_0312
Name: fxsA Funciton: suppressor of F plamsid exlusion of phage T7 |
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fxsA
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suppressor of F plamsid exlusion of phage T7
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Position: -195
Score: 3.7 Sequence: TAGTGTAAGCGATACCACAAAC
Locus tag: ETAE_2564
Name: galE2 Funciton: UDP-galactose-4-epimerase
Locus tag: ETAE_2565
Name: galT Funciton: galactose-1-phosphate uridylyltransferase
Locus tag: ETAE_2566
Name: galK Funciton: galactokinase
Locus tag: ETAE_2567
Name: galM Funciton: aldose 1-epimerase |
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galE2
|
UDP-galactose-4-epimerase
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galT
|
galactose-1-phosphate uridylyltransferase
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galK
|
galactokinase
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galM
|
aldose 1-epimerase
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Position: -275
Score: 3.7 Sequence: CAAAGTGAAAACGATTACATTT
Position: -61
Score: 4.5 Sequence: TTATGTGATCATGCGCACTTTA
Locus tag: ETAE_2966
Name: galP Funciton: sugar transporter |
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galP
|
sugar transporter
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Position: -227
Score: 5.1 Sequence: TTTTGTGATGAGCATCACAAAC
Locus tag: ETAE_1483
Name: gapA Funciton: glyceraldehyde-3-phosphate dehydrogenase
Locus tag: ETAE_1482
Name: yeaD Funciton: Aldose 1-epimerase |
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gapA
|
glyceraldehyde-3-phosphate dehydrogenase
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yeaD
|
Aldose 1-epimerase
|
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Position: -267
Score: 4.2 Sequence: GTTTGTGATCCTATTCACGATG
Locus tag: ETAE_3493
Name: glnA Funciton: glutamine synthetase
Locus tag: ETAE_3494
Name: glnL Funciton: nitrogen regulation protein NR(II)
Locus tag: ETAE_3495
Name: glnG Funciton: nitrogen regulation protein NR(I) |
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glnA
|
glutamine synthetase
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glnL
|
nitrogen regulation protein NR(II)
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glnG
|
nitrogen regulation protein NR(I)
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Position: -247
Score: 4 Sequence: TACTGTGAGAGATCGCTCATAT
Position: -142
Score: 4.8 Sequence: TAGAGTGATTTTGATCACATTG
Locus tag: ETAE_3115
Name: glpA Funciton: sn-glycerol-3-phosphate dehydrogenase subunit A
Locus tag: ETAE_3114
Name: glpB Funciton: Glycerol-3-phosphate dehydrogenase subunit B
Locus tag: ETAE_3113
Name: glpC Funciton: anaerobic glycerol-3-phosphate dehydrogenase subunit C |
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glpA
|
sn-glycerol-3-phosphate dehydrogenase subunit A
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glpB
|
Glycerol-3-phosphate dehydrogenase subunit B
|
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glpC
|
anaerobic glycerol-3-phosphate dehydrogenase subunit C
|
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Position: -124
Score: 4.3 Sequence: TTGTGTTATCCGCATCGCGTAA
Locus tag: ETAE_3312
Name: glpD Funciton: glycerol-3-phosphate dehydrogenase |
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glpD
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glycerol-3-phosphate dehydrogenase
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Position: -139
Score: 3.9 Sequence: TTTTTTGACGACACACACACAT
Locus tag: ETAE_3441
Name: glpF Funciton: facilitator for glycerol uptake
Locus tag: ETAE_3442
Name: glpK Funciton: glycerol kinase
Locus tag: ETAE_3443
Name: glpX Funciton: fructose 1,6-bisphosphatase II |
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glpF
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facilitator for glycerol uptake
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glpK
|
glycerol kinase
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glpX
|
fructose 1,6-bisphosphatase II
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Position: -200
Score: 3.7 Sequence: ATATGAGCGATCTCTCACAGTA
Locus tag: ETAE_3116
Name: glpT Funciton: glycerol-3-phosphate transporter
Locus tag: ETAE_3117
Name: glpQ Funciton: glycerophosphoryl diester phosphodiesterase |
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glpT
|
glycerol-3-phosphate transporter
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glpQ
|
glycerophosphoryl diester phosphodiesterase
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Position: -199
Score: 4 Sequence: TTTAATGATCTGCGCCACAAAA
Locus tag: ETAE_0026
Name: gltS Funciton: sodium/glutamate symporter |
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ETAE_0026
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gltS
|
sodium/glutamate symporter
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Position: -142
Score: 3.9 Sequence: AACTGCGAGTAGCATCACAGTT
Locus tag: ETAE_0135
Name: gntK Funciton: gluconate kinase 1
Locus tag: ETAE_0134
Name: gntU Funciton: Low-affinity gluconate transporter (Gluconate permease) |
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gntK
|
gluconate kinase 1
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gntU
|
Low-affinity gluconate transporter (Gluconate permease)
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Position: -278
Score: 4.9 Sequence: AACTGTGATGCAGCCCACATTT
Locus tag: ETAE_0527
Name: gltB Funciton: glutamate synthase, large subunit
Locus tag: ETAE_0526
Name: gltD Funciton: glutamate synthase, small subunit |
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gltB
|
glutamate synthase, large subunit
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gltD
|
glutamate synthase, small subunit
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Position: -205
Score: 4.2 Sequence: AAACGTGATCAATTTAACACCT
Locus tag: ETAE_0118
Name: hemC Funciton: porphobilinogen deaminase
Locus tag: ETAE_0117
Name: hemD Funciton: uroporphyrinogen-III synthase
Locus tag: ETAE_0116
Name: hemX Funciton: uroporphyrinogen III methylase
Locus tag: ETAE_0115
Name: hemY Funciton: HemY protein |
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hemC
|
porphobilinogen deaminase
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hemD
|
uroporphyrinogen-III synthase
|
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hemX
|
uroporphyrinogen III methylase
|
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hemY
|
HemY protein
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Position: -55
Score: 3.6 Sequence: TTGTGTAATACTTGTAACGCTA
Locus tag: ETAE_1852
Name: lpp Funciton: major outer membrane lipoprotein |
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lpp
|
major outer membrane lipoprotein
|
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Position: -275
Score: 3.7 Sequence: TAACGTGATCTTTATCTGTCTT
Locus tag: ETAE_2386
Name: lrhA Funciton: transcriptional regulator, LysR family |
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ETAE_2386
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lrhA
|
transcriptional regulator, LysR family
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Position: -146
Score: 3.7 Sequence: TAGCGCGGTCCCGATCACACTT
Locus tag: ETAE_3304
Name: malP Funciton: maltodextrin phosphorylase
Locus tag: ETAE_3305
Name: malQ Funciton: 4-alpha-glucanotransferase |
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malP
|
maltodextrin phosphorylase
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malQ
|
4-alpha-glucanotransferase
|
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Position: -212
Score: 3.8 Sequence: AAATGTGATCAGCCGCAATTTC
Locus tag: ETAE_3303
Name: malT Funciton: transcriptional regulator MalT |
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malT
|
transcriptional regulator MalT
|
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Position: -267
Score: 3.9 Sequence: ATTAACGATGGGCGTCACATAA
Locus tag: ETAE_1559
Name: manX Funciton: PTS enzyme IIAB, mannose-specific
Locus tag: ETAE_1558
Name: manY Funciton: PTS system, mannose/fructose/sorbose family, IIC subunit
Locus tag: ETAE_1557
Name: manZ Funciton: PTS enzyme IID, mannose-specific
Locus tag: ETAE_1556
Name: yobD Funciton: hypothetical protein |
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manX
|
PTS enzyme IIAB, mannose-specific
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manY
|
PTS system, mannose/fructose/sorbose family, IIC subunit
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manZ
|
PTS enzyme IID, mannose-specific
|
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yobD
|
hypothetical protein
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Position: -175
Score: 4.2 Sequence: TTTTTTGACAAACATCACCGAT
Locus tag: ETAE_0715
Name: mltA Funciton: membrane-bound lytic murein transglycosylase A |
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mltA
|
membrane-bound lytic murein transglycosylase A
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Position: -190
Score: 5 Sequence: ATTTGTGATAACTATCACCAAT
Locus tag: ETAE_2617
Name: nagB Funciton: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Locus tag: ETAE_2618
Name: nagA Funciton: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Locus tag: ETAE_2619
Name: nagC Funciton: N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
Locus tag: ETAE_2621
Name: nagD Funciton: Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem |
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nagB
|
Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
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nagA
|
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
|
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nagC
|
N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family
|
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nagD
|
Phosphatase NagD predicted to act in N-acetylglucosamine utilization subsystem
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Position: -157
Score: 4.8 Sequence: ATTGGTGATAGTTATCACAAAT
Locus tag: ETAE_2616
Name: nagE Funciton: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) |
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nagE
|
PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
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Position: -141
Score: 4.5 Sequence: TTTAGTGAACTAGATCGCACAA
Locus tag: ETAE_1381
Name: nanA Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: ETAE_1382
Name: nanT Funciton: Sialic acid transporter (permease) NanT
Locus tag: ETAE_1383
Name: yhcI Funciton: N-acetylmannosamine kinase (EC 2.7.1.60)
Locus tag: ETAE_1384
Name: yhcH Funciton: Putative sugar isomerase involved in processing of exogenous sialic acid |
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nanA
|
N-acetylneuraminate lyase (EC 4.1.3.3)
|
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nanT
|
Sialic acid transporter (permease) NanT
|
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yhcI
|
N-acetylmannosamine kinase (EC 2.7.1.60)
|
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yhcH
|
Putative sugar isomerase involved in processing of exogenous sialic acid
|
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Position: -166
Score: 4.3 Sequence: TTATTTGATTTGAATCAATTTT
Locus tag: ETAE_2070
Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3) |
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ndh
|
NADH dehydrogenase (EC 1.6.99.3)
|
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Position: -116
Score: 3.6 Sequence: AAATATGAGCATCTGCGCACAA
Locus tag: ETAE_3268
Name: nudE Funciton: ADP compounds hydrolase NudE (EC 3.6.1.-) |
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nudE
|
ADP compounds hydrolase NudE (EC 3.6.1.-)
|
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Position: -232
Score: 4.9 Sequence: TGATGTGATATGCATCACTTTT
Locus tag: ETAE_0482
Name: nupC2 Funciton: Na+ dependent nucleoside transporter |
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nupC2
|
Na+ dependent nucleoside transporter
|
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Position: -196
Score: 3.7 Sequence: TTTGGTGAGCATAATCACATCG
Locus tag: ETAE_1267
Name: ompA Funciton: outer membrane protein A |
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ompA
|
outer membrane protein A
|
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|
Position: -161
Score: 3.9 Sequence: CTGATTGATGTCTATCAAATTT
Locus tag: ETAE_1528
Name: ompW Funciton: outer membrane protein W |
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|
ompW
|
outer membrane protein W
|
||
|
Position: -82
Score: 3.9 Sequence: TTTTTTGATGACTATCTCGGTT
Locus tag: ETAE_3277
Name: pck Funciton: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) |
|||
|
pck
|
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
|
||
|
Position: -217
Score: 3.9 Sequence: CGGTGTGATAATCCTCAAACTT
Locus tag: ETAE_3343
Name: pldB Funciton: Lysophospholipase L2 (EC 3.1.1.5)
Locus tag: ETAE_3342
Name: yigL Funciton: Hydrolase (HAD superfamily) |
|||
|
pldB
|
Lysophospholipase L2 (EC 3.1.1.5)
|
||
|
yigL
|
Hydrolase (HAD superfamily)
|
||
|
Position: -145
Score: 4.4 Sequence: ATTTGTGAGCCAGCTCTCTTTT
Locus tag: ETAE_0492
Name: rnk Funciton: Regulator of nucleoside diphosphate kinase |
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|
rnk
|
Regulator of nucleoside diphosphate kinase
|
||
|
Position: -261
Score: 3.7 Sequence: ATGCGTGACCGTTGTCACTGTT
Locus tag: ETAE_2588
Name: sdhC Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: ETAE_2587
Name: sdhD Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: ETAE_2586
Name: sdhA Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: ETAE_2585
Name: sdhB Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) |
|||
|
sdhC
|
Succinate dehydrogenase cytochrome b-556 subunit
|
||
|
sdhD
|
Succinate dehydrogenase hydrophobic membrane anchor protein
|
||
|
sdhA
|
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
|
||
|
sdhB
|
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
|
||
|
Position: -131
Score: 4.4 Sequence: AAGTGTGTTCTGCTGCACAATT
Locus tag: ETAE_2298
Name: spr Funciton: predicted peptidase, outer membrane lipoprotein |
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|
spr
|
predicted peptidase, outer membrane lipoprotein
|
||
|
Position: -210
Score: 4.3 Sequence: TTTCGTGATAGCGCTATCATTT
Locus tag: ETAE_3025
Name: CKO_00488 Funciton: LacI-family transcriptional regulator |
|||
|
CKO_00488
|
LacI-family transcriptional regulator
|
||
|
Position: -129
Score: 4 Sequence: ATTTGTTAGCGCTTTCGCCTTT
Locus tag: ETAE_0570
Name: talB Funciton: transaldolase B |
|||
|
ETAE_0570
|
talB
|
transaldolase B
|
|
|
Position: -206
Score: 4 Sequence: AACTGTTAGGTCGATCACTTAT
Locus tag: ETAE_1506
Name: tdk Funciton: Thymidine kinase (EC 2.7.1.21) |
|||
|
tdk
|
Thymidine kinase (EC 2.7.1.21)
|
||
|
Position: -245
Score: 4.6 Sequence: TAATTTGATGAGAATCTCAATT
Locus tag: ETAE_2935
Name: tsx Funciton: Nucleoside-specific channel-forming protein Tsx precursor |
|||
|
tsx
|
Nucleoside-specific channel-forming protein Tsx precursor
|
||
|
Position: -148
Score: 4.7 Sequence: TATTGTGAAAATAATCACAGTT
Locus tag: ETAE_0143
Name: udp Funciton: Uridine phosphorylase (EC 2.4.2.3) |
|||
|
udp
|
Uridine phosphorylase (EC 2.4.2.3)
|
||
|
Position: -139
Score: 4.4 Sequence: TTAGGTGAGTCACGTCACAATA
Locus tag: ETAE_1034
Name: ushA Funciton: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) |
|||
|
ushA
|
UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5)
|
||
|
Position: -228
Score: 3.8 Sequence: AAGGTTGAGAGCTATCACAAAA
Locus tag: ETAE_0436
Name: uxaC Funciton: Uronate isomerase (EC 5.3.1.12)
Locus tag: ETAE_0437
Name: uxaB Funciton: Altronate oxidoreductase (EC 1.1.1.58) |
|||
|
uxaC
|
Uronate isomerase (EC 5.3.1.12)
|
||
|
uxaB
|
Altronate oxidoreductase (EC 1.1.1.58)
|
||
|
Position: -188
Score: 4.2 Sequence: AATCGTGAGGCGGATCAACCAA
Locus tag: ETAE_2289
Name: uxuA Funciton: Mannonate dehydratase (EC 4.2.1.8) |
|||
|
uxuA
|
Mannonate dehydratase (EC 4.2.1.8)
|
||
|
Position: -40
Score: 4.8 Sequence: TAATGTGAACAAAATCACGTTA
Locus tag: ETAE_2518
Name: ybiT Funciton: ABC transporter ATP-binding protein |
|||
|
ybiT
|
ABC transporter ATP-binding protein
|
||
|
Position: -124
Score: 4.3 Sequence: AAGTGTGATTGATGTCACTTTG
Position: -72
Score: 3.6 Sequence: CGGTGTGATGTCCATCAATGAA
Locus tag: ETAE_2360
Name: ycdZ Funciton: hypothetical protein |
|||
|
ycdZ
|
hypothetical protein
|
||
|
Position: -91
Score: 4.9 Sequence: GTTTGTGATGCTCATCACAAAA
Locus tag: ETAE_1484
Name: msrB Funciton: methionine sulfoxide reductase B
Locus tag: ETAE_1485
Name: b1777 Funciton: conserved hypothetical protein |
|||
|
msrB
|
methionine sulfoxide reductase B
|
||
|
b1777
|
conserved hypothetical protein
|
||
|
Position: -110
Score: 3.8 Sequence: TTTTGTGATATACTCCGCTATC
Locus tag: ETAE_2046
Name: yecF Funciton: hypothetical protein |
|||
|
ETAE_2046
|
yecF
|
hypothetical protein
|
|
|
Position: -34
Score: 3.6 Sequence: TTTTTTAACTCTTATCGAATAA
Locus tag: ETAE_2396
Name: yfbV Funciton: putative cytoplasmic protein |
|||
|
yfbV
|
putative cytoplasmic protein
|
||
|
Position: -82
Score: 3.8 Sequence: ATCCGTGATTTTCCTCTCACAC
Locus tag: ETAE_2834
Name: raiA Funciton: stationary phase translation inhibitor and ribosome stability factor |
|||
|
raiA
|
stationary phase translation inhibitor and ribosome stability factor
|
||
|
Position: -132
Score: 3.9 Sequence: AACCGTGTTTATCCTCACAAAT
Locus tag: ETAE_1921
Name: ygbI Funciton: Hypothetical transcriptional regulator ygbI |
|||
|
ygbI
|
Hypothetical transcriptional regulator ygbI
|
||
|
Position: -93
Score: 3.9 Sequence: ATTTGTGAGGATAAACACGGTT
Locus tag: ETAE_1922
Name: ygbJ Funciton: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
Locus tag: ETAE_1923
Name: ygbK Funciton: hypothetical protein |
|||
|
ygbJ
|
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
|
||
|
ygbK
|
hypothetical protein
|
||
|
Position: -56
Score: 3.7 Sequence: TTTTGTGGCGCAGATCATTAAA
Locus tag: ETAE_0025
Name: uraA1 Funciton: Xanthine permease |
|||
|
uraA1
|
Xanthine permease
|
||
|
Position: -180
Score: 3.8 Sequence: AAAACTAATCTATATCAAATAT
Locus tag: ETAE_0032
Name: yicG Funciton: Putative inner membrane protein |
|||
|
yicG
|
Putative inner membrane protein
|
||
|
Position: -128
Score: 3.7 Sequence: TATTGTTAATGTGTTAATAATT
Locus tag: ETAE_0086
Name: yifB Funciton: magnesium chelatase family protein |
|||
|
yifB
|
magnesium chelatase family protein
|
||
|
Position: -113
Score: 4.8 Sequence: ATTTGTGCACTTAATCACATAA
Locus tag: ETAE_1713
Name: mlc Funciton: ROK family transcriptional regulatory protein |
|||
|
mlc
|
ROK family transcriptional regulatory protein
|
||
|
Position: -68
Score: 4.9 Sequence: TGATGTGATCAGTAGCACATTT
Locus tag: ETAE_1164
Name: yohJ Funciton: LrgA family protein
Locus tag: ETAE_1163
Name: yohK Funciton: LrgB family protein |
|||
|
yohJ
|
LrgA family protein
|
||
|
yohK
|
LrgB family protein
|
||
|
Position: -276
Score: 4 Sequence: TTTTGTTATGTATAAAACGTTA
Locus tag: ETAE_2950
Name: rpiA Funciton: Ribose 5-phosphate isomerase A (EC 5.3.1.6) |
|||
|
rpiA
|
Ribose 5-phosphate isomerase A (EC 5.3.1.6)
|
||
|
Position: -235
Score: 4.1 Sequence: TCCTGTGATGTTGTTCACATGT
Locus tag: ETAE_3192
Name: yrdA Funciton: carbonic anhydrase, family 3 |
|||
|
yrdA
|
carbonic anhydrase, family 3
|
||
|
Position: -175
Score: 4.7 Sequence: TCATGTGACCTAGATCAAACTT
Locus tag: ETAE_2787
Name: guaB Funciton: inosine-5'-monophosphate dehydrogenase
Locus tag: ETAE_2786
Name: guaA Funciton: bifunctional GMP synthase/glutamine amidotransferase protein |
|||
|
guaB
|
inosine-5'-monophosphate dehydrogenase
|
||
|
guaA
|
bifunctional GMP synthase/glutamine amidotransferase protein
|
||
|
Position: -143
Score: 3.2 Sequence: TTTCATGATTTACATCAATAGT
Locus tag: ETAE_0658
Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex
Locus tag: ETAE_0659
Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: ETAE_0660
Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
|||
|
pdhR
|
Transcriptional repressor for pyruvate dehydrogenase complex
|
||
|
aceE
|
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
|
||
|
aceF
|
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
|
||
|
Position: -160
Score: 3.4 Sequence: AATTATGAATAAAAATACAATA
Locus tag: ETAE_3482
Name: argC Funciton: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Locus tag: ETAE_3481
Name: argB Funciton: Acetylglutamate kinase (EC 2.7.2.8)
Locus tag: ETAE_3480
Name: argG Funciton: Argininosuccinate synthase (EC 6.3.4.5)
Locus tag: ETAE_3479
Name: argH Funciton: Argininosuccinate lyase (EC 4.3.2.1) |
|||
|
argC
|
N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
|
||
|
argB
|
Acetylglutamate kinase (EC 2.7.2.8)
|
||
|
argG
|
Argininosuccinate synthase (EC 6.3.4.5)
|
||
|
argH
|
Argininosuccinate lyase (EC 4.3.2.1)
|
||
|
Position: -104
Score: 3.8 Sequence: TATAGTGACAGCGCTCAATAAA
Locus tag: ETAE_2177
Name: aroA Funciton: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19) |
|||
|
aroA
|
5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
|
||
|
Position: -221
Score: 4.4 Sequence: AATAGTGATATATCGCAAAATA
Locus tag: ETAE_0995
Name: hupB Funciton: HU, DNA-binding transcriptional regulator, beta subunit |
|||
|
hupB
|
HU, DNA-binding transcriptional regulator, beta subunit
|
||
|
Position: -186
Score: 3.7 Sequence: TAGCGTTATTTTTCTCATCATT
Locus tag: ETAE_2868
Name: gadB Funciton: Glutamate decarboxylase (EC 4.1.1.15)
Locus tag: ETAE_2867
Name: gadC Funciton: predicted glutamate:gamma-aminobutyric acid antiporter |
|||
|
gadB
|
Glutamate decarboxylase (EC 4.1.1.15)
|
||
|
gadC
|
predicted glutamate:gamma-aminobutyric acid antiporter
|
||
|
Position: -119
Score: 4 Sequence: AGGTGTTAAATTGATCACGTTT
Locus tag: ETAE_0119
Name: cyaA Funciton: Adenylate cyclase (EC 4.6.1.1) |
|||
|
cyaA
|
Adenylate cyclase (EC 4.6.1.1)
|
||
|
Position: -231
Score: 4.1 Sequence: ACGCGTGAATTCCATCACAATT
Locus tag: ETAE_0844
Name: tnaC Funciton: tryptophanase leader peptide
Locus tag: ETAE_0843
Name: tnaA Funciton: Tryptophanase (EC 4.1.99.1)
Locus tag: ETAE_0842
Name: tnaB Funciton: Low affinity tryptophan permease |
|||
|
tnaC
|
tryptophanase leader peptide
|
||
|
tnaA
|
Tryptophanase (EC 4.1.99.1)
|
||
|
tnaB
|
Low affinity tryptophan permease
|
||
|
Position: -138
Score: 4.5 Sequence: AGTTGAGATCATAATCACAAAT
Locus tag: ETAE_3292
Name: ulaA Funciton: Ascorbate-specific PTS system, EIIC component
Locus tag: ETAE_3293
Name: ulaB Funciton: Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)
Locus tag: ETAE_3294
Name: ulaC Funciton: Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)
Locus tag: ETAE_3295
Name: ulaD Funciton: 3-keto-L-gulonate-6-phosphate decarboxylase UlaD (EC 4.1.1.85) (L-ascorbate utilization protein D)
Locus tag: ETAE_3296
Name: ulaE Funciton: L-ribulose-5-phosphate 3-epimerase UlaE (EC 5.1.3.22) (L-ascorbate utilization protein E)
Locus tag: ETAE_3297
Name: ulaF Funciton: L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) (L-ascorbate utilization protein F) |
|||
|
ulaA
|
Ascorbate-specific PTS system, EIIC component
|
||
|
ulaB
|
Ascorbate-specific PTS system, EIIB component (EC 2.7.1.69)
|
||
|
ulaC
|
Ascorbate-specific PTS system, EIIA component (EC 2.7.1.-)
|
||
|
ulaD
|
3-keto-L-gulonate-6-phosphate decarboxylase UlaD (EC 4.1.1.85) (L-ascorbate utilization protein D)
|
||
|
ulaE
|
L-ribulose-5-phosphate 3-epimerase UlaE (EC 5.1.3.22) (L-ascorbate utilization protein E)
|
||
|
ulaF
|
L-ribulose-5-phosphate 4-epimerase UlaF (EC 5.1.3.4) (L-ascorbate utilization protein F)
|
||
|
Position: -194
Score: 3.6 Sequence: ATACTTTATTCAGATCAATTTT
Locus tag: ETAE_2844
Name: dcuB Funciton: C4-dicarboxylate transporter DcuB |
|||
|
dcuB
|
C4-dicarboxylate transporter DcuB
|
||
|
Position: -182
Score: 3.3 Sequence: AAACGTGATTTAACACCTGATT
Locus tag: ETAE_0183
Name: hupA Funciton: DNA-binding protein HU-alpha (HU-2) |
|||
|
hupA
|
DNA-binding protein HU-alpha (HU-2)
|
||
|
Position: -63
Score: 3.4 Sequence: CAATATGTTGTTTATCACTCAA
Locus tag: ETAE_3321
Name: ugpB Funciton: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
Locus tag: ETAE_3320
Name: ugpA Funciton: SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3)
Locus tag: ETAE_3319
Name: ugpE Funciton: SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3)
Locus tag: ETAE_3318
Name: ugpC Funciton: SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3)
Locus tag: ETAE_3317
Name: ugpQ Funciton: Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) |
|||
|
ugpB
|
Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
|
||
|
ugpA
|
SN-glycerol-3-phosphate transport system permease protein UgpA (TC 3.A.1.1.3)
|
||
|
ugpE
|
SN-glycerol-3-phosphate transport system permease protein UgpE (TC 3.A.1.1.3)
|
||
|
ugpC
|
SN-glycerol-3-phosphate transport ATP-binding protein UgpC (TC 3.A.1.1.3)
|
||
|
ugpQ
|
Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |