Regulog NtdR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | activator |
| Biological process: | Neotrehalosadiamine biosynthesis |
| Effector: | 3,3'-neotrehalosadiamine |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - LacI
- By effector - 3,3'-neotrehalosadiamine
- By pathway - Neotrehalosadiamine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 4 | 2 |
| Bacillus amyloliquefaciens FZB42 | ||
| Bacillus pumilus SAFR-032 | 4 | 2 |
| Bacillus licheniformis DSM 13 | 4 | 2 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | ||
| Bacillus halodurans C-125 | ||
| Bacillus clausii KSM-K16 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
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| CRON 1. | ||||||||||||
| ntdA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -74 score = 5.34735 sequence = ATGTTACCGATTTCAG Gene: BSU10550: NTD biosynthesis operon protein NtdA |
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Bacillus pumilus SAFR-032 Site: position = -78 score = 5.64668 sequence = CTGAAATCGATAACAT Gene: BPUM_0280: NTD biosynthesis operon protein NtdA |
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Bacillus licheniformis DSM 13 Site: position = -77 score = 5.78072 sequence = ATGGTATCGATTCCAT Gene: BLi03946: NTD biosynthesis operon protein NtdA |
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NTD biosynthesis operon protein NtdA |
| ntdB |
Gene: BSU10540: NTD biosynthesis operon putative hydrolase NtdB (EC 3.-.-.-) |
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Gene: BPUM_0281: NTD biosynthesis operon putative hydrolase NtdB (EC 3.-.-.-) |
Gene: BLi03945: NTD biosynthesis operon putative hydrolase NtdB (EC 3.-.-.-) |
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NTD biosynthesis operon putative hydrolase NtdB (EC 3.-.-.-) |
| ntdC |
Gene: BSU10530: NTD biosynthesis operon putative oxidoreductase NtdC (EC 1.-.-.-) |
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Gene: BPUM_0282: NTD biosynthesis operon putative oxidoreductase NtdC (EC 1.-.-.-) |
Gene: BLi03944: NTD biosynthesis operon putative oxidoreductase NtdC (EC 1.-.-.-) |
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Gene: GK1899: NTD biosynthesis operon putative oxidoreductase NtdC (EC 1.-.-.-) |
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NTD biosynthesis operon putative oxidoreductase NtdC (EC 1.-.-.-) |
| CRON 2. | ||||||||||||
| ntdR |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -45 score = 5.34735 sequence = CTGAAATCGGTAACAT Gene: BSU10560: Transcriptional regulator of neotrehalosadiamine utilization, LacI family |
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Bacillus pumilus SAFR-032 Site: position = -47 score = 5.64668 sequence = ATGTTATCGATTTCAG Site: position = -366 score = 4.81084 sequence = ATGTCATCGATCTCAT Gene: BPUM_0279: Transcriptional regulator of neotrehalosadiamine utilization, LacI family |
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Bacillus licheniformis DSM 13 Site: position = -45 score = 5.78072 sequence = ATGGAATCGATACCAT Gene: BLi03947: Transcriptional regulator of neotrehalosadiamine utilization, LacI family |
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Transcriptional regulator of neotrehalosadiamine utilization, LacI family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |