Regulog LicR - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	BglG
Regulation mode:	activator
Biological process:	Beta-glucosides utilization
Effector:	HPr, phosphocarrier protein; LicB, lichenan-specific enzyme IIB PTS component
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - BglG
By effector - HPr, phosphocarrier protein
By effector - LicB, lichenan-specific enzyme IIB PTS component
By pathway - Beta-glucosides utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	4	1
Bacillus amyloliquefaciens FZB42	4	1
Bacillus pumilus SAFR-032	4	1
Bacillus licheniformis DSM 13
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16	5	1
Oceanobacillus iheyensis HTE831	5	1
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
licB	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -111 score = 5.48627 sequence = TTTTCCGTTGCCTGCGGAAAA Gene: BSU38590: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	* Bacillus amyloliquefaciens FZB42 Site: position = -109 score = 6.17754 sequence = TTTTCCGTTAACAGCGGAAAA Gene: RBAM_035790: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	* Bacillus pumilus SAFR-032 Site: position = -105 score = 5.67937 sequence = TTTCCGCTTCCTAAAGGAAAA Gene: BPUM_3506: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Bacillus licheniformis DSM 13 Gene: BLi04089: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	* Bacillus clausii KSM-K16 Site: position = -123 score = 5.43733 sequence = TTTTCCGTTTATATGGCTAAA Gene: ABC0481: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	* Oceanobacillus iheyensis HTE831 Site: position = -97 score = 5.69611 sequence = TTTTCCGTTACACAGCGGAAA Gene: OB2760: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69)	Paenibacillus sp. JDR-2	PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69)
licC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU38580: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035780: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69)	Bacillus pumilus SAFR-032 Gene: BPUM_3505: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69)	Bacillus licheniformis DSM 13 Gene: BLi04088: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0482: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69)	Oceanobacillus iheyensis HTE831 Gene: OB2761: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69)	Paenibacillus sp. JDR-2	PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69)
licA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU38570: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035770: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69)	Bacillus pumilus SAFR-032 Gene: BPUM_3504: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69)	Bacillus licheniformis DSM 13 Gene: BLi04087: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0483: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69)	Oceanobacillus iheyensis HTE831 Gene: OB2762: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69)	Paenibacillus sp. JDR-2	PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69)
licH	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU38560: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035760: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Bacillus pumilus SAFR-032 Gene: BPUM_3503: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Bacillus licheniformis DSM 13 Gene: BLi04086: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0484: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Oceanobacillus iheyensis HTE831 Gene: OB2763: 6-phospho-beta-glucosidase (EC 3.2.1.86)	Paenibacillus sp. JDR-2	6-phospho-beta-glucosidase (EC 3.2.1.86)
licR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU38600: Transcriptional antiterminator of lichenan operon, BglG family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_035800: Transcriptional antiterminator of lichenan operon, BglG family	2 Bacillus pumilus SAFR-032 Gene: BPUM_3541: Transcriptional antiterminator of lichenan operon, BglG family Gene: BPUM_3507: Transcriptional antiterminator of lichenan operon, BglG family	Bacillus licheniformis DSM 13 Gene: BLi04090: Transcriptional antiterminator of lichenan operon, BglG family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579 Gene: BC0806: Transcriptional antiterminator of lichenan operon, BglG family	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0485: Transcriptional antiterminator of lichenan operon, BglG family	Oceanobacillus iheyensis HTE831 Gene: OB2764: Transcriptional antiterminator of lichenan operon, BglG family	Paenibacillus sp. JDR-2	Transcriptional antiterminator of lichenan operon, BglG family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog LicR - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --