Regulog LicR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | BglG |
| Regulation mode: | activator |
| Biological process: | Beta-glucosides utilization |
| Effector: | HPr, phosphocarrier protein; LicB, lichenan-specific enzyme IIB PTS component |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - BglG
- By effector - HPr, phosphocarrier protein
- By effector - LicB, lichenan-specific enzyme IIB PTS component
- By pathway - Beta-glucosides utilization
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 4 | 1 |
| Bacillus amyloliquefaciens FZB42 | 4 | 1 |
| Bacillus pumilus SAFR-032 | 4 | 1 |
| Bacillus licheniformis DSM 13 | ||
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | ||
| Bacillus halodurans C-125 | ||
| Bacillus clausii KSM-K16 | 5 | 1 |
| Oceanobacillus iheyensis HTE831 | 5 | 1 |
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| licB |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -111 score = 5.48627 sequence = TTTTCCGTTGCCTGCGGAAAA Gene: BSU38590: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
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Bacillus amyloliquefaciens FZB42 Site: position = -109 score = 6.17754 sequence = TTTTCCGTTAACAGCGGAAAA Gene: RBAM_035790: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
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Bacillus pumilus SAFR-032 Site: position = -105 score = 5.67937 sequence = TTTCCGCTTCCTAAAGGAAAA Gene: BPUM_3506: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
Gene: BLi04089: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
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Bacillus clausii KSM-K16 Site: position = -123 score = 5.43733 sequence = TTTTCCGTTTATATGGCTAAA Gene: ABC0481: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
*
Oceanobacillus iheyensis HTE831 Site: position = -97 score = 5.69611 sequence = TTTTCCGTTACACAGCGGAAA Gene: OB2760: PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
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PTS system, beta-glucosides-specific IIB component (EC 2.7.1.69); PTS system, cellobiose-specific IIB component (EC 2.7.1.69) |
| licC |
Gene: BSU38580: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69) |
Gene: RBAM_035780: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69) |
Gene: BPUM_3505: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69) |
Gene: BLi04088: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69) |
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Gene: ABC0482: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69) |
Gene: OB2761: PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69) |
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PTS system, beta-glucosides-specific IIC component (EC 2.7.1.69) |
| licA |
Gene: BSU38570: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69) |
Gene: RBAM_035770: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69) |
Gene: BPUM_3504: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69) |
Gene: BLi04087: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69) |
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Gene: ABC0483: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69) |
Gene: OB2762: PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69) |
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PTS system, beta-glucosides-specific IIA component (EC 2.7.1.69) |
| licH |
Gene: BSU38560: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
Gene: RBAM_035760: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
Gene: BPUM_3503: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
Gene: BLi04086: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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Gene: ABC0484: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
Gene: OB2763: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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6-phospho-beta-glucosidase (EC 3.2.1.86) |
| licR |
Gene: BSU38600: Transcriptional antiterminator of lichenan operon, BglG family |
Gene: RBAM_035800: Transcriptional antiterminator of lichenan operon, BglG family |
2
Bacillus pumilus SAFR-032 Gene: BPUM_3541: Transcriptional antiterminator of lichenan operon, BglG family Gene: BPUM_3507: Transcriptional antiterminator of lichenan operon, BglG family |
Gene: BLi04090: Transcriptional antiterminator of lichenan operon, BglG family |
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Gene: BC0806: Transcriptional antiterminator of lichenan operon, BglG family |
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Gene: ABC0485: Transcriptional antiterminator of lichenan operon, BglG family |
Gene: OB2764: Transcriptional antiterminator of lichenan operon, BglG family |
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Transcriptional antiterminator of lichenan operon, BglG family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |