Regulog ExuR - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Glucuronate utilization; Galacturonate utilization
Effector:	Glucuronate; Galacturonate
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By taxonomy - Bacillales
By TF family - LacI
By effector - Glucuronate
By effector - Galacturonate
By pathway - Glucuronate utilization
By pathway - Galacturonate utilization

Statistics of regulated genes
Genome	Genes	Operons
Bacillus subtilis subsp. subtilis str. 168	10	1
Bacillus amyloliquefaciens FZB42	5	1
Bacillus pumilus SAFR-032	4	1
Bacillus licheniformis DSM 13	5	1
Anoxybacillus flavithermus WK1
Geobacillus kaustophilus HTA426
Bacillus cereus ATCC 14579
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
uxaC	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -45 score = 6.50826 sequence = ATGTTAACGTTAACAT Gene: BSU12300: Uronate isomerase (EC 5.3.1.12)	* Bacillus amyloliquefaciens FZB42 Site: position = -38 score = 6.50826 sequence = TTGTTAACGTTAACAT Gene: RBAM_012380: Uronate isomerase (EC 5.3.1.12)	* Bacillus pumilus SAFR-032 Site: position = -52 score = 6.18193 sequence = TTGTTAACGTGAACAA Gene: BPUM_2987: Uronate isomerase (EC 5.3.1.12)	* Bacillus licheniformis DSM 13 Site: position = -43 score = 6.50826 sequence = TTGTTAACGTTAACAT Site: position = -75 score = 5.91759 sequence = ATGTTAACGTTCACAT Gene: BLi03516: Uronate isomerase (EC 5.3.1.12)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0705: Uronate isomerase (EC 5.3.1.12)	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831 Gene: OB0367: Uronate isomerase (EC 5.3.1.12)	Paenibacillus sp. JDR-2 Gene: Pjdr2_2923: Uronate isomerase (EC 5.3.1.12)	Uronate isomerase (EC 5.3.1.12)
exuM	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12310: Putative Na+:altronate/mannonate symporter	Bacillus amyloliquefaciens FZB42 Gene: RBAM_012390: Putative Na+:altronate/mannonate symporter	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi03515: Putative Na+:altronate/mannonate symporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Putative Na+:altronate/mannonate symporter
yjmC	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12320: Ureidoglycolate dehydrogenase	Bacillus amyloliquefaciens FZB42	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC4048: Ureidoglycolate dehydrogenase	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Ureidoglycolate dehydrogenase
yjmD	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12330: Predicted mannuronate reductase (EC 1.1.1.131)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_017960: Predicted mannuronate reductase (EC 1.1.1.131)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi01358: Predicted mannuronate reductase (EC 1.1.1.131)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16 Gene: ABC0630: Predicted mannuronate reductase (EC 1.1.1.131)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Predicted mannuronate reductase (EC 1.1.1.131)
uxuA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12340: Mannonate dehydratase (EC 4.2.1.8)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_017980: Mannonate dehydratase (EC 4.2.1.8)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi01356: Mannonate dehydratase (EC 4.2.1.8)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH1063: Mannonate dehydratase (EC 4.2.1.8)	Bacillus clausii KSM-K16 Gene: ABC0631: Mannonate dehydratase (EC 4.2.1.8)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_0333: Mannonate dehydratase (EC 4.2.1.8)	Mannonate dehydratase (EC 4.2.1.8)
uxuB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12350: D-mannonate oxidoreductase (EC 1.1.1.57)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_017990: D-mannonate oxidoreductase (EC 1.1.1.57)	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi01357: D-mannonate oxidoreductase (EC 1.1.1.57)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH1067: D-mannonate oxidoreductase (EC 1.1.1.57)	Bacillus clausii KSM-K16 Gene: ABC0632: D-mannonate oxidoreductase (EC 1.1.1.57)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_0334: D-mannonate oxidoreductase (EC 1.1.1.57)	D-mannonate oxidoreductase (EC 1.1.1.57)
exuT	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12360: Hexuronate transporter	Bacillus amyloliquefaciens FZB42 Gene: RBAM_018010: Hexuronate transporter	Bacillus pumilus SAFR-032	Bacillus licheniformis DSM 13 Gene: BLi01359: Hexuronate transporter	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Hexuronate transporter
exuR	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12370: Transcriptional regulator of hexuronate utilization, LacI family	Bacillus amyloliquefaciens FZB42 Gene: RBAM_012400: Transcriptional regulator of hexuronate utilization, LacI family	Bacillus pumilus SAFR-032 Gene: BPUM_2986: Transcriptional regulator of hexuronate utilization, LacI family	Bacillus licheniformis DSM 13 Gene: BLi03514: Transcriptional regulator of hexuronate utilization, LacI family	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2	Transcriptional regulator of hexuronate utilization, LacI family
uxaB	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12380: Altronate oxidoreductase (EC 1.1.1.58)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_012410: Altronate oxidoreductase (EC 1.1.1.58)	Bacillus pumilus SAFR-032 Gene: BPUM_2985: Altronate oxidoreductase (EC 1.1.1.58)	Bacillus licheniformis DSM 13 Gene: BLi03513: Altronate oxidoreductase (EC 1.1.1.58)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_2924: Altronate oxidoreductase (EC 1.1.1.58)	Altronate oxidoreductase (EC 1.1.1.58)
uxaA	Bacillus subtilis subsp. subtilis str. 168 Gene: BSU12390: Altronate hydrolase (EC 4.2.1.7)	Bacillus amyloliquefaciens FZB42 Gene: RBAM_012420: Altronate hydrolase (EC 4.2.1.7)	Bacillus pumilus SAFR-032 Gene: BPUM_2984: Altronate hydrolase (EC 4.2.1.7)	Bacillus licheniformis DSM 13 Gene: BLi03512: Altronate hydrolase (EC 4.2.1.7)	Anoxybacillus flavithermus WK1	Geobacillus kaustophilus HTA426	Bacillus cereus ATCC 14579	Bacillus halodurans C-125 Gene: BH0490: Altronate hydrolase (EC 4.2.1.7)	2 Bacillus clausii KSM-K16 Gene: ABC0442: Altronate hydrolase (EC 4.2.1.7) Gene: ABC1153: Altronate hydrolase (EC 4.2.1.7)	Oceanobacillus iheyensis HTE831	Paenibacillus sp. JDR-2 Gene: Pjdr2_2925: Altronate hydrolase (EC 4.2.1.7)	Altronate hydrolase (EC 4.2.1.7)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog ExuR - Bacillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --