Regulog TreR - Various betaproteobacteria
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Trehalose utilization |
| Effector: | Trehalose |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Various betaproteobacteria
- By TF family - GntR/Others
- By effector - Trehalose
- By pathway - Trehalose utilization
| Genome | Genes | Operons |
|---|---|---|
| Methylobacillus flagellatus KT | ||
| Methylotenera mobilis JLW8 | ||
| Methylophilales bacterium HTCC2181 | ||
| Nitrosospira multiformis ATCC 25196 | ||
| Nitrosomonas europaea ATCC 19718 | ||
| Thiobacillus denitrificans | ||
| Azoarcus sp. EbN1 | ||
| Dechloromonas aromatica RCB | ||
| Thauera sp. MZ1T | ||
| Chromobacterium violaceum ATCC 12472 | 3 | 1 |
| Laribacter hongkongensis HLHK9 | ||
| Neisseria meningitidis MC58 |
| Genes | Function | ||||||||||||
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| CRON 1. | |||||||||||||
| treP |
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Chromobacterium violaceum ATCC 12472 Site: position = -146 score = 4.70552 sequence = AACTCGTACAGACGAGTG Site: position = -122 score = 6.48772 sequence = AACTTGTATGTACAAGTT Gene: CV3300: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) |
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PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) |
| treA |
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Gene: CV3299: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
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Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
| lamB |
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Gene: CV3298: Predicted trehalose-specific porin |
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Predicted trehalose-specific porin |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |