Regulog PdxQ - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Alcanivorax borkumensis SK2
Chromohalobacter salexigens DSM 3043
Hahella chejuensis KCTC 2396	1	1
Marinomonas sp. MWYL1
Oceanospirillum sp. MED92
Oceanobacter sp. RED65
Reinekea sp. MED297
Cellvibrio japonicus Ueda107
Marinobacter aqueolei
Marinobacter sp. ELB17
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
pdxO	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	* Hahella chejuensis KCTC 2396 Site: position = -104 score = 10.2935 sequence = AAGTGGACCTG-(13)-AAGTGGACATT-(4)-CATATCCAATT Gene: HCH_01885: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein	Marinomonas sp. MWYL1	Oceanospirillum sp. MED92	Oceanobacter sp. RED65	Reinekea sp. MED297	Cellvibrio japonicus Ueda107	Marinobacter aqueolei	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --