Regulog MalR5 - Bifidobacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Maltose utilization; Maltodextrin utilization |
| Effector: | Maltose |
| Phylum: | Actinobacteria |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - LacI
- By effector - Maltose
- By pathway - Maltose utilization
- By pathway - Maltodextrin utilization
| Genome | Genes | Operons |
|---|---|---|
| Bifidobacterium adolescentis ATCC 15703 | 5 | 4 |
| Bifidobacterium angulatum DSM 20098 | 2 | 2 |
| Bifidobacterium animalis subsp. lactis AD011 | ||
| Bifidobacterium bifidum NCIMB 41171 | ||
| Bifidobacterium breve DSM 20213 | ||
| Bifidobacterium dentium Bd1 | 3 | 2 |
| Bifidobacterium gallicum DSM 20093 | ||
| Bifidobacterium longum NCC2705 | ||
| Bifidobacterium longum subsp. infantis ATCC 15697 | ||
| Gardnerella vaginalis 409-05 |
| Genes | Function | ||||||||||
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| CRON 1. | |||||||||||
| malR5 |
*2
Bifidobacterium adolescentis ATCC 15703 Site: position = -97 score = 5.29896 sequence = ATGCAAGCGTTTTTAC Gene: BAD_0451: Transcriptional regulator of maltose/maltodextrin utilization, LacI family Site: position = -119 score = 5.22669 sequence = ATGATAGCGCTTTCAT Site: position = -207 score = 4.82528 sequence = ATGGAAGCGTTTTCAC Gene: BAD_0970: Transcriptional regulator of maltose/maltodextrin utilization, LacI family |
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Bifidobacterium angulatum DSM 20098 Site: position = -95 score = 4.96113 sequence = ATGATAGCGCTTACAT Gene: BIFANG_00866: Transcriptional regulator of maltose/maltodextrin utilization, LacI family |
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Bifidobacterium dentium Bd1 Site: position = -96 score = 5.29896 sequence = ATGCAAGCGTTTTTAC Site: position = -186 score = 4.58837 sequence = ATAATAGCGCTTGCGC Gene: BDP_0623: Transcriptional regulator of maltose/maltodextrin utilization, LacI family |
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Transcriptional regulator of maltose/maltodextrin utilization, LacI family |
| CRON 2. | |||||||||||
| malL |
*2
Bifidobacterium adolescentis ATCC 15703 Site: position = -235 score = 5.29896 sequence = GTAAAAACGCTTGCAT Gene: BAD_0452: Alpha-glucosidase (EC 3.2.1.20) Site: position = -153 score = 5.22669 sequence = ATGAAAGCGCTATCAT Site: position = -65 score = 4.82528 sequence = GTGAAAACGCTTCCAT Gene: BAD_0971: Alpha-glucosidase (EC 3.2.1.20) |
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Bifidobacterium angulatum DSM 20098 Site: position = -159 score = 4.96113 sequence = ATGTAAGCGCTATCAT Gene: BIFANG_00865: Alpha-glucosidase (EC 3.2.1.20) |
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Bifidobacterium dentium Bd1 Site: position = -30 score = 5.36889 sequence = GTACAAACGCTTGCAT Site: position = -162 score = 4.58837 sequence = GCGCAAGCGCTATTAT Gene: BDP_0624: Alpha-glucosidase (EC 3.2.1.20) |
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Alpha-glucosidase (EC 3.2.1.20) |
| malT |
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Gene: BDP_0625: Putative maltose transporter |
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Putative maltose transporter |
| malE2 |
Gene: BAD_0972: Maltose ABC transporter, substrate-binding protein |
Gene: BIFANG_00863: Maltose ABC transporter, substrate-binding protein |
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Maltose ABC transporter, substrate-binding protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |