Regulog BgrT5 - Bifidobacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	TetR
Regulation mode:
Biological process:	Cellobiose utilization
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Bifidobacterium adolescentis ATCC 15703	1	1
Bifidobacterium angulatum DSM 20098
Bifidobacterium animalis subsp. lactis AD011
Bifidobacterium bifidum NCIMB 41171
Bifidobacterium breve DSM 20213
Bifidobacterium dentium Bd1	1	1
Bifidobacterium gallicum DSM 20093
Bifidobacterium longum NCC2705
Bifidobacterium longum subsp. infantis ATCC 15697
Gardnerella vaginalis 409-05

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
cbpA	* Bifidobacterium adolescentis ATCC 15703 Site: position = -107 score = 7.05255 sequence = TTATTTATAAGTTTATAAACAA Gene: BAD_0439: Cellobiose phosphorylase (EC 2.4.1.20)	Bifidobacterium angulatum DSM 20098	Bifidobacterium animalis subsp. lactis AD011 Gene: BLA_0623: Cellobiose phosphorylase (EC 2.4.1.20)	Bifidobacterium bifidum NCIMB 41171	Bifidobacterium breve DSM 20213	* Bifidobacterium dentium Bd1 Site: position = -146 score = 7.65887 sequence = TTATTTATAAAGTTATAAATAA Gene: BDP_2127: Cellobiose phosphorylase (EC 2.4.1.20)	Bifidobacterium gallicum DSM 20093	Bifidobacterium longum NCC2705	Bifidobacterium longum subsp. infantis ATCC 15697	Gardnerella vaginalis 409-05	Cellobiose phosphorylase (EC 2.4.1.20)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --