Regulog BgrT1 - Bifidobacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Beta-glucosides utilization |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - TetR
- By pathway - Beta-glucosides utilization
| Genome | Genes | Operons |
|---|---|---|
| Bifidobacterium adolescentis ATCC 15703 | 2 | 2 |
| Bifidobacterium angulatum DSM 20098 | 2 | 2 |
| Bifidobacterium animalis subsp. lactis AD011 | ||
| Bifidobacterium bifidum NCIMB 41171 | ||
| Bifidobacterium breve DSM 20213 | 2 | 2 |
| Bifidobacterium dentium Bd1 | 2 | 2 |
| Bifidobacterium gallicum DSM 20093 | ||
| Bifidobacterium longum NCC2705 | ||
| Bifidobacterium longum subsp. infantis ATCC 15697 | 2 | 2 |
| Gardnerella vaginalis 409-05 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| bgrT1 |
*
Bifidobacterium adolescentis ATCC 15703 Site: position = -141 score = 6.04119 sequence = ACTAACCGGTCGGTAGGT Gene: BAD_1195: Predicted beta-glucoside specific transcriptional regulator, TetR family |
*
Bifidobacterium angulatum DSM 20098 Site: position = -140 score = 6.45257 sequence = ACCAACCGATTGGTAGGT Gene: BIFANG_00895: Predicted beta-glucoside specific transcriptional regulator, TetR family |
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|
*
Bifidobacterium breve DSM 20213 Site: position = -92 score = 6.26745 sequence = ACCAACCGGTTGGTAGGT Gene: BIFBRE_00467: Predicted beta-glucoside specific transcriptional regulator, TetR family |
*
Bifidobacterium dentium Bd1 Site: position = -141 score = 6.45257 sequence = ACCAACCGATTGGTAGGT Gene: BDP_1658: Predicted beta-glucoside specific transcriptional regulator, TetR family |
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|
*
Bifidobacterium longum subsp. infantis ATCC 15697 Site: position = -92 score = 6.08233 sequence = ACCAACCGGCTGGTAGGT Gene: Blon_0624: Predicted beta-glucoside specific transcriptional regulator, TetR family |
|
Predicted beta-glucoside specific transcriptional regulator, TetR family |
| CRON 2. | |||||||||||
| bglX1 |
*
Bifidobacterium adolescentis ATCC 15703 Site: position = -93 score = 6.04119 sequence = ACCTACCGACCGGTTAGT Gene: BAD_1194: Beta-glucosidase (EC 3.2.1.21) |
*
Bifidobacterium angulatum DSM 20098 Site: position = -75 score = 6.45257 sequence = ACCTACCAATCGGTTGGT Gene: BIFANG_00896: Beta-glucosidase (EC 3.2.1.21) |
Gene: BLA_0039: Beta-glucosidase (EC 3.2.1.21) |
|
*
Bifidobacterium breve DSM 20213 Site: position = -172 score = 6.26745 sequence = ACCTACCAACCGGTTGGT Gene: BIFBRE_00468: Beta-glucosidase (EC 3.2.1.21) |
*
Bifidobacterium dentium Bd1 Site: position = -65 score = 6.45257 sequence = ACCTACCAATCGGTTGGT Gene: BDP_1657: Beta-glucosidase (EC 3.2.1.21) |
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*
Bifidobacterium longum subsp. infantis ATCC 15697 Site: position = -142 score = 6.08233 sequence = ACCTACCAGCCGGTTGGT Gene: Blon_0625: Beta-glucosidase (EC 3.2.1.21) |
|
Beta-glucosidase (EC 3.2.1.21) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |