Regulog BgrT2 - Bifidobacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Beta-glucosides utilization |
| Effector: | |
| Phylum: | Actinobacteria |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - TetR
- By pathway - Beta-glucosides utilization
| Genome | Genes | Operons |
|---|---|---|
| Bifidobacterium adolescentis ATCC 15703 | 3 | 3 |
| Bifidobacterium angulatum DSM 20098 | 1 | 1 |
| Bifidobacterium animalis subsp. lactis AD011 | ||
| Bifidobacterium bifidum NCIMB 41171 | ||
| Bifidobacterium breve DSM 20213 | 1 | 1 |
| Bifidobacterium dentium Bd1 | 3 | 3 |
| Bifidobacterium gallicum DSM 20093 | ||
| Bifidobacterium longum NCC2705 | 1 | 1 |
| Bifidobacterium longum subsp. infantis ATCC 15697 | ||
| Gardnerella vaginalis 409-05 |
| Genes | Function | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||||
| bgrT4 |
*
Bifidobacterium adolescentis ATCC 15703 Site: position = -271 score = 6.02459 sequence = AACTACCATTTGGTAACT Gene: BAD_1210: Predicted beta-glucoside specific transcriptional regulator, TetR family |
|
|
|
|
*
Bifidobacterium dentium Bd1 Site: position = -261 score = 5.66448 sequence = AACTACCATATGGTAACT Gene: BDP_1682: Predicted beta-glucoside specific transcriptional regulator, TetR family |
|
|
|
|
Predicted beta-glucoside specific transcriptional regulator, TetR family |
| CRON 2. | |||||||||||
| bglX2 |
*
Bifidobacterium adolescentis ATCC 15703 Site: position = 33 score = 6.81097 sequence = AAATACCAATTGGTAATT Gene: BAD_1197: Beta-glucosidase (EC 3.2.1.21) |
*
Bifidobacterium angulatum DSM 20098 Site: position = -54 score = 6.45086 sequence = AACTACCAAATGGTATTT Gene: BIFANG_00887: Beta-glucosidase (EC 3.2.1.21) |
Gene: BLA_0893: Beta-glucosidase (EC 3.2.1.21) |
|
*
Bifidobacterium breve DSM 20213 Site: position = -56 score = 6.95038 sequence = AACTACCAATTGGTAATT Gene: BIFBRE_00462: Beta-glucosidase (EC 3.2.1.21) |
*
Bifidobacterium dentium Bd1 Site: position = -55 score = 6.95038 sequence = AACTACCAATTGGTAATT Gene: BDP_1671: Beta-glucosidase (EC 3.2.1.21) |
|
*
Bifidobacterium longum NCC2705 Site: position = -56 score = 6.95038 sequence = AACTACCAATTGGTAATT Gene: BL1757: Beta-glucosidase (EC 3.2.1.21) |
|
|
Beta-glucosidase (EC 3.2.1.21) |
| CRON 3. | |||||||||||
| bglT |
*
Bifidobacterium adolescentis ATCC 15703 Site: position = -102 score = 6.02459 sequence = AGTTACCAAATGGTAGTT Gene: BAD_1209: Predicted beta-glucoside permease, MFS family |
|
|
|
|
*
Bifidobacterium dentium Bd1 Site: position = -83 score = 5.66448 sequence = AGTTACCATATGGTAGTT Gene: BDP_1681: Predicted beta-glucoside permease, MFS family |
|
|
|
|
Predicted beta-glucoside permease, MFS family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |