Regulog HutR - Staphylococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | LysR |
| Regulation mode: | activator (repressor) |
| Biological process: | Histidine utilization |
| Effector: | Histidine |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - LysR
- By effector - Histidine
- By pathway - Histidine utilization
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 4 | 3 |
| Staphylococcus capitis SK14 | 3 | 2 |
| Staphylococcus epidermidis ATCC 12228 | ||
| Staphylococcus carnosus subsp. carnosus TM300 | 4 | 2 |
| Staphylococcus haemolyticus JCSC1435 | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 3 | 2 |
| Macrococcus caseolyticus JCSC5402 | 3 | 2 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| hutP |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -155 score = 5.07499 sequence = ATAATTAGTTAATTTGT Gene: SA0308: predicted histidine transporter |
|
|
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -412 score = 6.23578 sequence = ATAATTAGTTTATTTAT Gene: Sca_1829: predicted histidine transporter |
|
|
|
predicted histidine transporter |
| hutU |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -122 score = 6.23578 sequence = ATAATTAGTTTATTTAT Gene: SA2122: urocanate hydratase |
*
Staphylococcus capitis SK14 Site: position = -240 score = 5.07499 sequence = ATAAATAATTAGTTTAT Site: position = -236 score = 6.23578 sequence = ATAATTAGTTTATTTAT Gene: STACA0001_1156: urocanate hydratase |
|
Gene: Sca_1828: urocanate hydratase |
|
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -183 score = 6.23578 sequence = ATAATTAGTTTATTTAT Gene: SSP0572: urocanate hydratase |
*
Macrococcus caseolyticus JCSC5402 Site: position = -83 score = 5.88688 sequence = ATAGTTAGTTTATTTAT Gene: MCCL_1457: urocanate hydratase |
urocanate hydratase |
| hutI |
Gene: SA2121: imidazolonepropionase |
Gene: STACA0001_1157: imidazolonepropionase |
|
Gene: Sca_1827: imidazolonepropionase |
|
Gene: SSP0573: imidazolonepropionase |
Gene: MCCL_1456: imidazolonepropionase |
imidazolonepropionase |
| CRON 2. | ||||||||
| hutR |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -54 score = 6.23578 sequence = ATAAATAAACTAATTAT Gene: SA2123: predicted regulator of histidine utilization, LysR family |
*
Staphylococcus capitis SK14 Site: position = -51 score = 6.23578 sequence = ATAAATAAACTAATTAT Gene: STACA0001_1155: predicted regulator of histidine utilization, LysR family |
|
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -176 score = 6.23578 sequence = ATAAATAAACTAATTAT Gene: Sca_1830: predicted regulator of histidine utilization, LysR family |
|
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -61 score = 6.23578 sequence = ATAAATAAACTAATTAT Gene: SSP0571: predicted regulator of histidine utilization, LysR family |
*
Macrococcus caseolyticus JCSC5402 Site: position = -50 score = 5.88688 sequence = ATAAATAAACTAACTAT Gene: MCCL_1458: predicted regulator of histidine utilization, LysR family |
predicted regulator of histidine utilization, LysR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |