Regulog GlxR - Bifidobacteriaceae

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Glycerate utilization
Effector:	D-glycerate
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Bifidobacterium longum subsp. infantis ATCC 15697
Bifidobacterium adolescentis ATCC 15703
Bifidobacterium angulatum DSM 20098
Bifidobacterium animalis subsp. lactis AD011
Bifidobacterium bifidum NCIMB 41171
Bifidobacterium breve DSM 20213
Bifidobacterium dentium Bd1
Bifidobacterium gallicum DSM 20093
Bifidobacterium longum NCC2705	2	2
Gardnerella vaginalis 409-05

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes											Function

CRON 1.
glxK	Bifidobacterium longum subsp. infantis ATCC 15697 Gene: Blon_1484: Glycerate kinase (EC 2.7.1.31)	Bifidobacterium adolescentis ATCC 15703 Gene: BAD_1196: Glycerate kinase (EC 2.7.1.31)	Bifidobacterium angulatum DSM 20098 Gene: BIFANG_00892: Glycerate kinase (EC 2.7.1.31)	Bifidobacterium animalis subsp. lactis AD011	Bifidobacterium bifidum NCIMB 41171 Gene: BbifN4_010100008696: Glycerate kinase (EC 2.7.1.31)	Bifidobacterium breve DSM 20213	Bifidobacterium dentium Bd1	Bifidobacterium gallicum DSM 20093	* Bifidobacterium longum NCC2705 Site: position = 42 score = 6.93545 sequence = TACGGAAAACGTTTACCGTT Gene: BL0845: Glycerate kinase (EC 2.7.1.31)	Gardnerella vaginalis 409-05	Glycerate kinase (EC 2.7.1.31)

CRON 2.
glxR	Bifidobacterium longum subsp. infantis ATCC 15697	Bifidobacterium adolescentis ATCC 15703	Bifidobacterium angulatum DSM 20098	Bifidobacterium animalis subsp. lactis AD011	Bifidobacterium bifidum NCIMB 41171	Bifidobacterium breve DSM 20213	Bifidobacterium dentium Bd1	Bifidobacterium gallicum DSM 20093	* Bifidobacterium longum NCC2705 Site: position = -158 score = 6.93545 sequence = AACGGTAAACGTTTTCCGTA Gene: BL0846: Transcriptional regulator of glycerate kinase, LacI family	Gardnerella vaginalis 409-05	Transcriptional regulator of glycerate kinase, LacI family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --