Regulog GlnR - Staphylococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor |
| Biological process: | Nitrogen assimilation |
| Effector: | Feedback-inhibited GlnA, glutamine synthetase |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - MerR
- By effector - Feedback-inhibited GlnA, glutamine synthetase
- By pathway - Nitrogen assimilation
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 3 | 2 |
| Staphylococcus capitis SK14 | 3 | 2 |
| Staphylococcus epidermidis ATCC 12228 | 3 | 2 |
| Staphylococcus carnosus subsp. carnosus TM300 | 2 | 1 |
| Staphylococcus haemolyticus JCSC1435 | 3 | 2 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 3 | 2 |
| Macrococcus caseolyticus JCSC5402 | 2 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| nrgA |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -73 score = 4.55614 sequence = ATGTAATAAAACTTAACGC Gene: SA1848: ammonium transporter |
*
Staphylococcus capitis SK14 Site: position = -96 score = 5.32086 sequence = ATGTCACTTAATCTTACAC Gene: STACA0001_2123: ammonium transporter |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -96 score = 5.25894 sequence = ATGTAACTTAAAGTGACAT Site: position = -74 score = 4.45319 sequence = GTGTAACATGACCTTACCT Gene: SE1644: ammonium transporter |
|
*
Staphylococcus haemolyticus JCSC1435 Site: position = -74 score = 4.74731 sequence = GTGTCATTTTATCTTACAC Site: position = -96 score = 4.78809 sequence = TTGTTATATTATGTAACAT Gene: SH0989: ammonium transporter |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -96 score = 4.83095 sequence = GCGTTAGAAAAGGTAACAT Gene: SSP2288: ammonium transporter |
|
ammonium transporter |
| CRON 2. | ||||||||
| glnR |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -84 score = 5.87041 sequence = ATGTTAGAAAACCTGACAT Gene: SA1149: HTH-type transcriptional regulator GlnR |
*
Staphylococcus capitis SK14 Site: position = -85 score = 5.97003 sequence = ATGTTAGAAAACCTTACAT Gene: STACA0001_1553: HTH-type transcriptional regulator GlnR |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -88 score = 5.94521 sequence = ATGTCAGAAAACCTTACAT Gene: SE0986: HTH-type transcriptional regulator GlnR |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -85 score = 5.94521 sequence = ATGTCAGAAAACCTTACAT Gene: Sca_0958: HTH-type transcriptional regulator GlnR |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -86 score = 5.97003 sequence = ATGTAAGAAAACCTAACAT Gene: SH1601: HTH-type transcriptional regulator GlnR |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -83 score = 5.97003 sequence = ATGTTAGAAAACCTTACAT Gene: SSP1452: HTH-type transcriptional regulator GlnR |
*
Macrococcus caseolyticus JCSC5402 Site: position = -103 score = 5.9966 sequence = ATGTAAGGTTTCCTTACAT Gene: MCCL_0899: HTH-type transcriptional regulator GlnR |
HTH-type transcriptional regulator GlnR |
| glnA |
Gene: SA1150: glutamine synthetase |
Gene: STACA0001_1554: glutamine synthetase |
Gene: SE0987: glutamine synthetase |
Gene: Sca_0957: glutamine synthetase |
Gene: SH1600: glutamine synthetase |
Gene: SSP1451: glutamine synthetase |
Gene: MCCL_0900: glutamine synthetase |
glutamine synthetase |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |