Regulog Cpin_2755 - Sphingobacteria

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Bacteroidetes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

By taxonomy - Sphingobacteria
By TF family - GntR/MocR

Statistics of regulated genes
Genome	Genes	Operons
Salinibacter ruber DSM 13855
Pedobacter sp. BAL39	1	1
Pedobacter heparinus DSM 2366
Microscilla marina ATCC 23134
Algoriphagus sp. PR1
Chitinophaga pinensis DSM 2588	3	1
Cytophaga hutchinsonii ATCC 33406
Dyadobacter fermentans DSM 18053

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
COG2128	Salinibacter ruber DSM 13855	Pedobacter sp. BAL39	Pedobacter heparinus DSM 2366	Microscilla marina ATCC 23134	Algoriphagus sp. PR1	2 Chitinophaga pinensis DSM 2588* Gene: Cpin_2179: alkylhydroperoxidase like protein, AhpD family Site: position = -82 score = 12.3158 sequence = ATCTGTACTA-(13)-ATCTGTATGA-(6)-TAGTACAATC Gene: Cpin_3546: alkylhydroperoxidase like protein, AhpD family	Cytophaga hutchinsonii ATCC 33406	Dyadobacter fermentans DSM 18053 Gene: Dfer_3098: alkylhydroperoxidase like protein, AhpD family	alkylhydroperoxidase like protein, AhpD family
COG1182 (AcpD)	Salinibacter ruber DSM 13855	Pedobacter sp. BAL39	Pedobacter heparinus DSM 2366	Microscilla marina ATCC 23134	Algoriphagus sp. PR1	Chitinophaga pinensis DSM 2588 Gene: Cpin_3545: NAD(P)H dehydrogenase (quinone)/Acyl carrier protein phosphodiesterase	Cytophaga hutchinsonii ATCC 33406	Dyadobacter fermentans DSM 18053	NAD(P)H dehydrogenase (quinone)/Acyl carrier protein phosphodiesterase
Cpin_2758	Salinibacter ruber DSM 13855	Pedobacter sp. BAL39	Pedobacter heparinus DSM 2366	Microscilla marina ATCC 23134	Algoriphagus sp. PR1	Chitinophaga pinensis DSM 2588 Gene: Cpin_3544: GCN5-related N-acetyltransferase	Cytophaga hutchinsonii ATCC 33406	Dyadobacter fermentans DSM 18053	GCN5-related N-acetyltransferase

CRON 2.
COG702	Salinibacter ruber DSM 13855	* Pedobacter sp. BAL39 Site: position = -236 score = 11.9492 sequence = GTCTGGACTG-(13)-AGTTGGATGG-(6)-CAATCCAAAC Gene: PBAL39_16229: predicted nucleoside-diphosphate-sugar epimerase/NmrA family protein	Pedobacter heparinus DSM 2366	Microscilla marina ATCC 23134	Algoriphagus sp. PR1	Chitinophaga pinensis DSM 2588	Cytophaga hutchinsonii ATCC 33406	2 Dyadobacter fermentans DSM 18053 Gene: Dfer_5449: predicted nucleoside-diphosphate-sugar epimerase/NmrA family protein Gene: Dfer_0905: predicted nucleoside-diphosphate-sugar epimerase/NmrA family protein	predicted nucleoside-diphosphate-sugar epimerase/NmrA family protein

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Cpin_2755 - Sphingobacteria

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --