Regulog Cpin_2755 - Sphingobacteria
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Bacteroidetes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Sphingobacteria
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Salinibacter ruber DSM 13855 | ||
| Pedobacter sp. BAL39 | 1 | 1 |
| Pedobacter heparinus DSM 2366 | ||
| Microscilla marina ATCC 23134 | ||
| Algoriphagus sp. PR1 | ||
| Chitinophaga pinensis DSM 2588 | 3 | 1 |
| Cytophaga hutchinsonii ATCC 33406 | ||
| Dyadobacter fermentans DSM 18053 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| COG2128 |
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*2
Chitinophaga pinensis DSM 2588 Gene: Cpin_2179: alkylhydroperoxidase like protein, AhpD family Site: position = -82 score = 12.3158 sequence = ATCTGTACTA-(13)-ATCTGTATGA-(6)-TAGTACAATC Gene: Cpin_3546: alkylhydroperoxidase like protein, AhpD family |
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Gene: Dfer_3098: alkylhydroperoxidase like protein, AhpD family |
alkylhydroperoxidase like protein, AhpD family |
| COG1182 (AcpD) |
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Gene: Cpin_3545: NAD(P)H dehydrogenase (quinone)/Acyl carrier protein phosphodiesterase |
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NAD(P)H dehydrogenase (quinone)/Acyl carrier protein phosphodiesterase |
| Cpin_2758 |
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Gene: Cpin_3544: GCN5-related N-acetyltransferase |
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GCN5-related N-acetyltransferase |
| CRON 2. | |||||||||
| COG702 |
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Pedobacter sp. BAL39 Site: position = -236 score = 11.9492 sequence = GTCTGGACTG-(13)-AGTTGGATGG-(6)-CAATCCAAAC Gene: PBAL39_16229: predicted nucleoside-diphosphate-sugar epimerase/NmrA family protein |
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2
Dyadobacter fermentans DSM 18053 Gene: Dfer_5449: predicted nucleoside-diphosphate-sugar epimerase/NmrA family protein Gene: Dfer_0905: predicted nucleoside-diphosphate-sugar epimerase/NmrA family protein |
predicted nucleoside-diphosphate-sugar epimerase/NmrA family protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |