Regulog Vapar_1337 - Comamonadaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Acidovorax avenae subsp. citrulli AAC00-1
Comamonas testosteroni KF-1
Delftia acidovorans SPH-1
Leptothrix cholodnii SP-6
Methylibium petroleiphilum PM1
Polaromonas naphthalenivorans CJ2
Polaromonas sp. JS666
Rhodoferax ferrireducens DSM 15236
Variovorax paradoxus S110	1	1
Verminephrobacter eiseniae EF01-2
Acidovorax sp. JS42

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
COG436 (PF00155)	Acidovorax avenae subsp. citrulli AAC00-1	Comamonas testosteroni KF-1	Delftia acidovorans SPH-1	Leptothrix cholodnii SP-6	Methylibium petroleiphilum PM1	Polaromonas naphthalenivorans CJ2	Polaromonas sp. JS666	Rhodoferax ferrireducens DSM 15236	* Variovorax paradoxus S110 Site: position = -99 score = 8.22217 sequence = AACTGTACTGCA-(13)-AAGTGTGGCTGT Gene: Vapar_1338: Pyridoxal phosphate-dependent aspartate/tyrosine/aromatic aminotransferase	Verminephrobacter eiseniae EF01-2	Acidovorax sp. JS42	Pyridoxal phosphate-dependent aspartate/tyrosine/aromatic aminotransferase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --