Regulog EutR - Rhizobiales

Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - GntR/MocR
- By pathway - Ectoine utilization
Genome | Genes | Operons |
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Agrobacterium tumefaciens str. C58 (Cereon) | 9 | 2 |
Azorhizobium caulinodans ORS 571 | ||
Bartonella quintana str. Toulouse | ||
Bradyrhizobium japonicum USDA 110 | ||
Bradyrhizobium sp. BTAi1 | ||
Brucella melitensis 16M | ||
Mesorhizobium loti MAFF303099 | 7 | 3 |
Mesorhizobium sp. BNC1 | ||
Nitrobacter winogradskyi Nb-255 | ||
Rhizobium etli CFN 42 | 11 | 3 |
Rhizobium leguminosarum bv. viciae 3841 | 14 | 3 |
Rhizobium sp. NGR234 | 15 | 4 |
Rhodopseudomonas palustris CGA009 | ||
Sinorhizobium meliloti 1021 | 14 | 3 |
Xanthobacter autotrophicus Py2 |
Genes | Function | |||||||||||||||
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CRON 1. | ||||||||||||||||
doeX |
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*2
Mesorhizobium loti MAFF303099 Gene: mlr6100: Transcriptional regulator, AsnC family Site: position = -70 score = 3.23949 sequence = TCGAAATCAGTGCAAT Gene: mll7129: Transcriptional regulator, AsnC family |
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*2
Rhizobium etli CFN 42 Gene: RHE_PF00200: Transcriptional regulator, AsnC family Site: position = -87 score = 3.85591 sequence = TGAAAATCAGTTCAAT Gene: RHE_PF00189: Transcriptional regulator, AsnC family |
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Rhizobium leguminosarum bv. viciae 3841 Site: position = -87 score = 3.85591 sequence = TGAAAATCAGTTCAAT Gene: pRL120045: Transcriptional regulator, AsnC family |
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Rhizobium sp. NGR234 Site: position = 4 score = 3.64166 sequence = TCAAAATCAGCTCAAT Gene: NGR_b23340: Transcriptional regulator, AsnC family |
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Sinorhizobium meliloti 1021 Site: position = -90 score = 3.64166 sequence = TCAAAATCAGCTCAAT Gene: SMb20425: Transcriptional regulator, AsnC family |
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Transcriptional regulator, AsnC family |
doeC |
Gene: Atu4762: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
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Gene: mll7128: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
Gene: Meso_2417: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
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Gene: RHE_PF00201: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
Gene: pRL120044: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
Gene: NGR_b23370: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
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Gene: SMb20424: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
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Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
doeD |
Gene: Atu4761: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
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2
Mesorhizobium loti MAFF303099 Gene: mll7127: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) Gene: mlr6101: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
Gene: Meso_2416: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
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Gene: RHE_PF00202: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
Gene: pRL120043: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
Gene: NGR_b23380: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
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Gene: SMb20423: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
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Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
COG604 (Qor) |
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Gene: mll7125: Quinone oxidoreductase (EC 1.6.5.5)/alcohol dehydrogenase |
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Gene: RHE_PF00203: Quinone oxidoreductase (EC 1.6.5.5)/alcohol dehydrogenase |
Gene: pRL120042: Quinone oxidoreductase (EC 1.6.5.5)/alcohol dehydrogenase |
Gene: NGR_b23390: Quinone oxidoreductase (EC 1.6.5.5)/alcohol dehydrogenase |
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Gene: SMb20422: Quinone oxidoreductase (EC 1.6.5.5)/alcohol dehydrogenase |
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Quinone oxidoreductase (EC 1.6.5.5)/alcohol dehydrogenase |
CRON 2. | ||||||||||||||||
ehuA |
Gene: Atu4752: ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
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Mesorhizobium loti MAFF303099 Site: position = -34 score = 3.1404 sequence = ATTGTCATGATATTAT Site: position = -11 score = 3.47947 sequence = ATTGACATGATTTGGC Gene: mlr7132: ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
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Rhizobium etli CFN 42 Site: position = -88 score = 3.1404 sequence = ATTGTCATGATATTAT Site: position = -65 score = 3.62167 sequence = ATTGACATGATTTTCG Gene: RHE_PF00187: ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
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Rhizobium leguminosarum bv. viciae 3841 Site: position = -65 score = 4.00457 sequence = ATTGACATGATTTTGA Site: position = -88 score = 3.1404 sequence = ATTGTCATGATATTAT Gene: pRL120047: ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
*2
Rhizobium sp. NGR234 Gene: NGR_a01510: ectoine/hydroxyectoine ABC transporter, ATP-binding protein Site: position = -119 score = 3.87567 sequence = ATTGACATGATTTTGG Site: position = -142 score = 3.1404 sequence = ATTGTCATGATATTAT Gene: NGR_b23320: ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
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Sinorhizobium meliloti 1021 Site: position = -136 score = 3.1404 sequence = ATTGTCATGATATTAT Site: position = -113 score = 3.64818 sequence = ATTGACATGATTTGGG Gene: SMb20427: ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
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ectoine/hydroxyectoine ABC transporter, ATP-binding protein |
ehuB |
Gene: Atu4755: ectoine/hydroxyectoine ABC transporter, solute-binding protein |
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2
Mesorhizobium loti MAFF303099 Gene: mlr7133: ectoine/hydroxyectoine ABC transporter, solute-binding protein Gene: mll9751: ectoine/hydroxyectoine ABC transporter, solute-binding protein |
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Gene: RHE_PF00186: ectoine/hydroxyectoine ABC transporter, solute-binding protein |
Gene: pRL120048: ectoine/hydroxyectoine ABC transporter, solute-binding protein |
2
Rhizobium sp. NGR234 Gene: NGR_a01540: ectoine/hydroxyectoine ABC transporter, solute-binding protein Gene: NGR_b23310: ectoine/hydroxyectoine ABC transporter, solute-binding protein |
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Gene: SMb20428: ectoine/hydroxyectoine ABC transporter, solute-binding protein |
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ectoine/hydroxyectoine ABC transporter, solute-binding protein |
ehuC |
Gene: Atu4754: ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Gene: mlr7135: ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Gene: RHE_PF00185: ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
Gene: pRL120049: ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
2
Rhizobium sp. NGR234 Gene: NGR_a01530: ectoine/hydroxyectoine ABC transporter, permease protein EhuC Gene: NGR_b23300: ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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Gene: SMb20429: ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
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ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
ehuD |
Gene: Atu4753: ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Gene: mlr7136: ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Gene: RHE_PF00184: ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
Gene: pRL120050: ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
2
Rhizobium sp. NGR234 Gene: NGR_a01520: ectoine/hydroxyectoine ABC transporter, permease protein EhuD Gene: NGR_b23290: ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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Gene: SMb20430: ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
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ectoine/hydroxyectoine ABC transporter, permease protein EhuD |
eutA |
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Gene: mlr7137: ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase |
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Gene: RHE_PF00183: ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase |
Gene: pRL120051: ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase |
Gene: NGR_b23280: ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase |
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Gene: SMb20431: ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase |
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ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase |
eutB |
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Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -74 score = 3.9321 sequence = ATTGAATCATTACAAT Site: position = -52 score = 4.2256 sequence = ATTGACATGATTTTAT Gene: Atu4759: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
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Gene: mlr7138: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
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Gene: RHE_PF00182: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
Gene: pRL120052: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
*3
Rhizobium sp. NGR234 Gene: NGR_b23270: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) Site: position = -10 score = 3.06363 sequence = ACTGTATTAGGTGAAT Site: position = 12 score = 3.28094 sequence = TCGAACTTAAGTCTAG Gene: NGR_a01490: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) Gene: NGR_b06860: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
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Gene: SMb20432: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
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ectoine utilization protein, threonine dehydratase (EC 4.3.1.19) |
eutC |
Gene: Atu4758: ectoine utilization protein EutC |
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Gene: mlr7139: ectoine utilization protein EutC |
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Gene: RHE_PF00181: ectoine utilization protein EutC |
Gene: pRL120053: ectoine utilization protein EutC |
3
Rhizobium sp. NGR234 Gene: NGR_b06870: ectoine utilization protein EutC Gene: NGR_a01480: ectoine utilization protein EutC Gene: NGR_b23260: ectoine utilization protein EutC |
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Gene: SMb20433: ectoine utilization protein EutC |
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ectoine utilization protein EutC |
eutD |
Gene: Atu4757: ectoine utilization protein EutD, dipeptidase |
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3
Mesorhizobium loti MAFF303099 Gene: mll5970: ectoine utilization protein EutD, dipeptidase Gene: mlr7141: ectoine utilization protein EutD, dipeptidase Gene: mlr8570: ectoine utilization protein EutD, dipeptidase |
Gene: Meso_2419: ectoine utilization protein EutD, dipeptidase |
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Gene: RHE_PF00180: ectoine utilization protein EutD, dipeptidase |
Gene: pRL120054: ectoine utilization protein EutD, dipeptidase |
3
Rhizobium sp. NGR234 Gene: NGR_b23250: ectoine utilization protein EutD, dipeptidase Gene: NGR_a01470: ectoine utilization protein EutD, dipeptidase Gene: NGR_a01460: ectoine utilization protein EutD, dipeptidase |
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Gene: SMb20434: ectoine utilization protein EutD, dipeptidase |
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ectoine utilization protein EutD, dipeptidase |
eutE |
Gene: Atu4756: ectoine utilization protein EutE, deacylase |
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Gene: BBta_7662: ectoine utilization protein EutE, deacylase |
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2
Mesorhizobium loti MAFF303099 Gene: mlr7142: ectoine utilization protein EutE, deacylase Gene: mlr6093: ectoine utilization protein EutE, deacylase |
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Gene: RHE_PF00179: ectoine utilization protein EutE, deacylase |
Gene: pRL120055: ectoine utilization protein EutE, deacylase |
Gene: NGR_b23240: ectoine utilization protein EutE, deacylase |
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Gene: SMb20435: ectoine utilization protein EutE, deacylase |
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ectoine utilization protein EutE, deacylase |
CRON 3. | ||||||||||||||||
EutR |
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Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -19 score = 3.13415 sequence = TCGAAAACGAGACAAT Gene: Atu4760: Transcriptional regulator of GntR family with aminotransferase-like domain |
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Mesorhizobium loti MAFF303099 Site: position = -29 score = 3.23949 sequence = ATTGCACTGATTTCGA Gene: mlr7131: Transcriptional regulator of GntR family with aminotransferase-like domain |
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Rhizobium etli CFN 42 Site: position = -30 score = 3.85591 sequence = ATTGAACTGATTTTCA Gene: RHE_PF00188: Transcriptional regulator of GntR family with aminotransferase-like domain |
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Rhizobium leguminosarum bv. viciae 3841 Site: position = -30 score = 3.85591 sequence = ATTGAACTGATTTTCA Gene: pRL120046: Transcriptional regulator of GntR family with aminotransferase-like domain |
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Rhizobium sp. NGR234 Site: position = -30 score = 3.64166 sequence = ATTGAGCTGATTTTGA Gene: NGR_b23330: Transcriptional regulator of GntR family with aminotransferase-like domain |
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Sinorhizobium meliloti 1021 Site: position = -135 score = 3.64166 sequence = ATTGAGCTGATTTTGA Gene: SMb20426: Transcriptional regulator of GntR family with aminotransferase-like domain |
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Transcriptional regulator of GntR family with aminotransferase-like domain |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |