Regulog EutR - Rhodobacterales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Ectoine utilization
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 36 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - GntR/MocR
By pathway - Ectoine utilization

Statistics of regulated genes
Genome	Genes	Operons
Paracoccus denitrificans PD1222	11	1
Rhodobacter sphaeroides 2.4.1	2	2
Jannaschia sp. CCS1
Loktanella vestfoldensis SKA53	2	2
Oceanicola granulosus HTCC2516
Oceanicola batsensis HTCC2597	4	1
Rhodobacterales bacterium HTCC2654
Roseovarius sp. 217
Roseovarius nubinhibens ISM	2	2
Silicibacter TM1040	1	1
Silicibacter pomeroyi DSS-3	14	3
Sulfitobacter sp. EE-36	2	2
Roseobacter sp. MED193	1	1
Hyphomonas neptunium ATCC 15444
Oceanicaulis alexandrii HTCC2633

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
yjjS	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -98 score = 6.86081 sequence = ATTGTATC-(1)-GTCACAAT Site: position = -25 score = 6.23729 sequence = ATTGTATC-(0)-AACACAAA Gene: RSP_0019: Uncharacterized conserved small protein	Jannaschia sp. CCS1	* Loktanella vestfoldensis SKA53 Site: position = -107 score = 7.31405 sequence = ATTGTATC-(1)-GATACAAT Site: position = -32 score = 6.8658 sequence = ATTGTGTC-(0)-AATACAAT Gene: SKA53_04433: Uncharacterized conserved small protein	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	* Roseovarius nubinhibens ISM Site: position = -164 score = 7.38877 sequence = ATTGTATC-(0)-AATACAAT Site: position = -108 score = 7.24275 sequence = ATTGTATT-(1)-ATAACAAT Site: position = -36 score = 7.29806 sequence = ATTGTATT-(0)-GGTACAAT Gene: ISM_16305: Uncharacterized conserved small protein	Silicibacter TM1040	* Silicibacter pomeroyi DSS-3 Site: position = -35 score = 6.09929 sequence = CTTGTGTC-(0)-AATACAAT Site: position = -112 score = 7.36779 sequence = ATTGTACC-(1)-ATTACAAT Site: position = -89 score = 6.11102 sequence = TTTGATCT-(1)-GGGACAAT Gene: SPO1689: Uncharacterized conserved small protein	* Sulfitobacter sp. EE-36 Site: position = -35 score = 6.8658 sequence = ATTGTGTC-(0)-AATACAAT Site: position = -109 score = 7.36779 sequence = ATTGTACC-(1)-ATTACAAT Gene: EE36_14877: Uncharacterized conserved small protein	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Uncharacterized conserved small protein

CRON 2.
teaA	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	* Oceanicola batsensis HTCC2597 Site: position = -62 score = 7.19062 sequence = ATTGTCCT-(0)-GCGACAAT Site: position = -40 score = 6.06597 sequence = TTTGACAT-(2)-TGGACAAT Gene: OB2597_13918: TRAP-type C4-dicarboxylate transport system, periplasmic component	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040	* Silicibacter pomeroyi DSS-3 Site: position = -74 score = 7.26516 sequence = ATTGACAT-(2)-AGTACAAT Site: position = -96 score = 6.98587 sequence = ATTGTCGC-(0)-GCGACAAT Gene: SPO1147: TRAP-type C4-dicarboxylate transport system, periplasmic component	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	TRAP-type C4-dicarboxylate transport system, periplasmic component
teaB	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597 Gene: OB2597_13913: TRAP-type C4-dicarboxylate transport system, small permease component	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3 Gene: SPO1146: TRAP-type C4-dicarboxylate transport system, small permease component	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	TRAP-type C4-dicarboxylate transport system, small permease component
teaC	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597 Gene: OB2597_13908: TRAP-type C4-dicarboxylate transport system, large permease component	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3 Gene: SPO1145: TRAP-type C4-dicarboxylate transport system, large permease component	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	TRAP-type C4-dicarboxylate transport system, large permease component
OB2597_13903	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597 Gene: OB2597_13903: Universal stress protein UspA and related nucleotide-binding proteins	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3 Gene: SPO1144: Universal stress protein UspA and related nucleotide-binding proteins	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Universal stress protein UspA and related nucleotide-binding proteins
eutA	Paracoccus denitrificans PD1222 Gene: Pden_0284: ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3 Gene: SPO1143: ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	ectoine utilization protein, pyridoxal-5'-phosphate-dependent decarboxylase/isomerase
eutB	Paracoccus denitrificans PD1222 Gene: Pden_0285: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19)	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597 Gene: OB2597_11711: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19)	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217 Gene: ROS217_11057: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19)	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3 Gene: SPO1142: ectoine utilization protein, threonine dehydratase (EC 4.3.1.19)	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	ectoine utilization protein, threonine dehydratase (EC 4.3.1.19)
eutC	Paracoccus denitrificans PD1222 Gene: Pden_0286: ectoine utilization protein EutC	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597 Gene: OB2597_11706: ectoine utilization protein EutC	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217 Gene: ROS217_11062: ectoine utilization protein EutC	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3 Gene: SPO1141: ectoine utilization protein EutC	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	ectoine utilization protein EutC
eutD	Paracoccus denitrificans PD1222 Gene: Pden_0287: ectoine utilization protein EutD, dipeptidase	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1 Gene: Jann_0850: ectoine utilization protein EutD, dipeptidase	Loktanella vestfoldensis SKA53 Gene: SKA53_09189: ectoine utilization protein EutD, dipeptidase	Oceanicola granulosus HTCC2516 Gene: OG2516_02574: ectoine utilization protein EutD, dipeptidase	Oceanicola batsensis HTCC2597 Gene: OB2597_11716: ectoine utilization protein EutD, dipeptidase	Rhodobacterales bacterium HTCC2654 Gene: RB2654_17141: ectoine utilization protein EutD, dipeptidase	Roseovarius sp. 217 Gene: ROS217_11052: ectoine utilization protein EutD, dipeptidase	Roseovarius nubinhibens ISM Gene: ISM_07880: ectoine utilization protein EutD, dipeptidase	Silicibacter TM1040 Gene: TM1040_1921: ectoine utilization protein EutD, dipeptidase	Silicibacter pomeroyi DSS-3 Gene: SPO1140: ectoine utilization protein EutD, dipeptidase	Sulfitobacter sp. EE-36 Gene: EE36_10809: ectoine utilization protein EutD, dipeptidase	Roseobacter sp. MED193 Gene: MED193_17174: ectoine utilization protein EutD, dipeptidase	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	ectoine utilization protein EutD, dipeptidase
eutE	Paracoccus denitrificans PD1222 Gene: Pden_0288: ectoine utilization protein EutE, deacylase	Rhodobacter sphaeroides 2.4.1 Gene: RSP_3886: ectoine utilization protein EutE, deacylase	Jannaschia sp. CCS1 Gene: Jann_0849: ectoine utilization protein EutE, deacylase	Loktanella vestfoldensis SKA53 Gene: SKA53_09184: ectoine utilization protein EutE, deacylase	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040 Gene: TM1040_2694: ectoine utilization protein EutE, deacylase	Silicibacter pomeroyi DSS-3 Gene: SPO1139: ectoine utilization protein EutE, deacylase	Sulfitobacter sp. EE-36 Gene: EE36_10804: ectoine utilization protein EutE, deacylase	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	ectoine utilization protein EutE, deacylase
doeX	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597 Gene: OB2597_11701: Transcriptional regulator, AsnC family	Rhodobacterales bacterium HTCC2654 Gene: RB2654_17146: Transcriptional regulator, AsnC family	Roseovarius sp. 217 Gene: ROS217_11067: Transcriptional regulator, AsnC family	Roseovarius nubinhibens ISM	Silicibacter TM1040 Gene: TM1040_2693: Transcriptional regulator, AsnC family	Silicibacter pomeroyi DSS-3 Gene: SPO1138: Transcriptional regulator, AsnC family	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Transcriptional regulator, AsnC family
doeC	Paracoccus denitrificans PD1222 Gene: Pden_0289: Succinate-semialdehyde dehydrogenase (EC 1.2.1.16)	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597 Gene: OB2597_11696: Succinate-semialdehyde dehydrogenase (EC 1.2.1.16)	Rhodobacterales bacterium HTCC2654 Gene: RB2654_17151: Succinate-semialdehyde dehydrogenase (EC 1.2.1.16)	Roseovarius sp. 217 Gene: ROS217_11072: Succinate-semialdehyde dehydrogenase (EC 1.2.1.16)	Roseovarius nubinhibens ISM	Silicibacter TM1040 Gene: TM1040_2692: Succinate-semialdehyde dehydrogenase (EC 1.2.1.16)	Silicibacter pomeroyi DSS-3 Gene: SPO1137: Succinate-semialdehyde dehydrogenase (EC 1.2.1.16)	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Succinate-semialdehyde dehydrogenase (EC 1.2.1.16)
doeD	Paracoccus denitrificans PD1222 Gene: Pden_0290: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1 Gene: Jann_0851: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Loktanella vestfoldensis SKA53 Gene: SKA53_09194: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Oceanicola granulosus HTCC2516 Gene: OG2516_09218: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Oceanicola batsensis HTCC2597 Gene: OB2597_11691: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Rhodobacterales bacterium HTCC2654 Gene: RB2654_17156: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Roseovarius sp. 217 Gene: ROS217_11077: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Roseovarius nubinhibens ISM Gene: ISM_12525: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Silicibacter TM1040 Gene: TM1040_2691: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Silicibacter pomeroyi DSS-3 Gene: SPO1136: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Sulfitobacter sp. EE-36 Gene: EE36_10799: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Roseobacter sp. MED193 Gene: MED193_17169: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19)
ehuA	* Paracoccus denitrificans PD1222 Site: position = -55 score = 6.24456 sequence = ATTGACCT-(0)-GATTTAAT Site: position = -77 score = 5.88374 sequence = ATTGTTAT-(0)-GATATTAT Gene: Pden_0280: ectoine/hydroxyectoine ABC transporter, ATP-binding protein	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	ectoine/hydroxyectoine ABC transporter, ATP-binding protein
ehuB	Paracoccus denitrificans PD1222 Gene: Pden_0281: ectoine/hydroxyectoine ABC transporter solute-binding protein	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	ectoine/hydroxyectoine ABC transporter solute-binding protein
ehuC	Paracoccus denitrificans PD1222 Gene: Pden_0282: ectoine/hydroxyectoine ABC transporter, permease protein EhuC	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	ectoine/hydroxyectoine ABC transporter, permease protein EhuC
ehuD	Paracoccus denitrificans PD1222 Gene: Pden_0283: ectoine/hydroxyectoine ABC transporter, permease protein EhuD	Rhodobacter sphaeroides 2.4.1	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	Roseovarius nubinhibens ISM	Silicibacter TM1040	Silicibacter pomeroyi DSS-3	Sulfitobacter sp. EE-36	Roseobacter sp. MED193	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	ectoine/hydroxyectoine ABC transporter, permease protein EhuD

CRON 3.
eutR	Paracoccus denitrificans PD1222	* Rhodobacter sphaeroides 2.4.1 Site: position = -3 score = 6.86081 sequence = ATTGTGAC-(1)-GATACAAT Site: position = -75 score = 6.23729 sequence = TTTGTGTT-(0)-GATACAAT Gene: RSP_0018: Ectoine utilization regulator, GntR/MocR family	Jannaschia sp. CCS1	* Loktanella vestfoldensis SKA53 Site: position = 3 score = 7.31405 sequence = ATTGTATC-(1)-GATACAAT Site: position = -71 score = 6.8658 sequence = ATTGTATT-(0)-GACACAAT Gene: SKA53_04438: Ectoine utilization regulator, GntR/MocR family	Oceanicola granulosus HTCC2516	Oceanicola batsensis HTCC2597	Rhodobacterales bacterium HTCC2654	Roseovarius sp. 217	* Roseovarius nubinhibens ISM Site: position = -63 score = 7.38877 sequence = ATTGTATT-(0)-GATACAAT Site: position = -191 score = 7.29806 sequence = ATTGTACC-(0)-AATACAAT Site: position = -120 score = 7.24275 sequence = ATTGTTAT-(1)-AATACAAT Gene: ISM_16300: Ectoine utilization regulator, GntR/MocR family	* Silicibacter TM1040 Site: position = -49 score = 5.28833 sequence = CATGTATT-(1)-AATACAAA Site: position = -6 score = 6.84482 sequence = ATTGTGAT-(1)-GGTACAAT Site: position = -78 score = 6.07302 sequence = TTTGTATT-(0)-GATGCAAT Gene: TM1040_1386: Ectoine utilization regulator, GntR/MocR family	* Silicibacter pomeroyi DSS-3 Site: position = -82 score = 6.09929 sequence = ATTGTATT-(0)-GACACAAG Site: position = -29 score = 6.11102 sequence = ATTGTCCC-(1)-AGATCAAA Site: position = -6 score = 7.36779 sequence = ATTGTAAT-(1)-GGTACAAT Gene: SPO1690: Ectoine utilization regulator, GntR/MocR family	* Sulfitobacter sp. EE-36 Site: position = -79 score = 6.8658 sequence = ATTGTATT-(0)-GACACAAT Site: position = -6 score = 7.36779 sequence = ATTGTAAT-(1)-GGTACAAT Gene: EE36_14882: Ectoine utilization regulator, GntR/MocR family	* Roseobacter sp. MED193 Site: position = -80 score = 6.8658 sequence = ATTGTGTT-(0)-GATACAAT Site: position = -48 score = 5.676 sequence = AGAGTTTT-(0)-GATACAAT Site: position = -6 score = 7.36779 sequence = ATTGTAAT-(1)-GGTACAAT Gene: MED193_04751: Ectoine utilization regulator, GntR/MocR family	Hyphomonas neptunium ATCC 15444	Oceanicaulis alexandrii HTCC2633	Ectoine utilization regulator, GntR/MocR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog EutR - Rhodobacterales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --