Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog PA2100 - Pseudomonadaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Multidrug efflux
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 2 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Azotobacter vinelandii AvOP
Pseudomonas aeruginosa PAO1 2 1
Pseudomonas entomophila L48
Pseudomonas fluorescens Pf-5 1 1
Pseudomonas mendocina ymp
Pseudomonas putida KT2440
Pseudomonas stutzeri A1501
Pseudomonas syringae pv. tomato str. DC3000
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG697 (RhaT)
 
Azotobacter vinelandii AvOP
*
Pseudomonas aeruginosa PAO1

Site:
position = -167
score = 13.1383
sequence = ATTGAATC-(1)-GTGTCAAT-(6)-TTTGACCG

Gene: PA2101: Permease of the drug/metabolite transporter (DMT) superfamily
 
Pseudomonas entomophila L48
*
Pseudomonas fluorescens Pf-5

Site:
position = -128
score = 13.7151
sequence = ATTGACAC-(1)-GTGTCAAT-(6)-TTTGACAG

Gene: PFL_1866: Permease of the drug/metabolite transporter (DMT) superfamily
 
Pseudomonas mendocina ymp
 
Pseudomonas putida KT2440
 
Pseudomonas stutzeri A1501
 
Pseudomonas syringae pv. tomato str. DC3000
Permease of the drug/metabolite transporter (DMT) superfamily
COG1310
 
Azotobacter vinelandii AvOP
 
Pseudomonas aeruginosa PAO1

Gene: PA2102: Predicted metal-dependent protease of the PAD1/JAB1 superfamily
 
Pseudomonas entomophila L48
 
Pseudomonas fluorescens Pf-5
 
Pseudomonas mendocina ymp
 
Pseudomonas putida KT2440
 
Pseudomonas stutzeri A1501
 
Pseudomonas syringae pv. tomato str. DC3000
Predicted metal-dependent protease of the PAD1/JAB1 superfamily
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD