Regulog PA2100 - Pseudomonadaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Multidrug efflux |
| Effector: | |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pseudomonadaceae
- By TF family - GntR/MocR
- By pathway - Multidrug efflux
| Genome | Genes | Operons |
|---|---|---|
| Azotobacter vinelandii AvOP | ||
| Pseudomonas aeruginosa PAO1 | 2 | 1 |
| Pseudomonas entomophila L48 | ||
| Pseudomonas fluorescens Pf-5 | 1 | 1 |
| Pseudomonas mendocina ymp | ||
| Pseudomonas putida KT2440 | ||
| Pseudomonas stutzeri A1501 | ||
| Pseudomonas syringae pv. tomato str. DC3000 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| COG697 (RhaT) |
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Pseudomonas aeruginosa PAO1 Site: position = -167 score = 13.1383 sequence = ATTGAATC-(1)-GTGTCAAT-(6)-TTTGACCG Gene: PA2101: Permease of the drug/metabolite transporter (DMT) superfamily |
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Pseudomonas fluorescens Pf-5 Site: position = -128 score = 13.7151 sequence = ATTGACAC-(1)-GTGTCAAT-(6)-TTTGACAG Gene: PFL_1866: Permease of the drug/metabolite transporter (DMT) superfamily |
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Permease of the drug/metabolite transporter (DMT) superfamily |
| COG1310 |
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Gene: PA2102: Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
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Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |