Regulog PA2100 - Pseudomonadaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Multidrug efflux
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Azotobacter vinelandii AvOP
Pseudomonas aeruginosa PAO1	2	1
Pseudomonas entomophila L48
Pseudomonas fluorescens Pf-5	1	1
Pseudomonas mendocina ymp
Pseudomonas putida KT2440
Pseudomonas stutzeri A1501
Pseudomonas syringae pv. tomato str. DC3000

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
COG697 (RhaT)	Azotobacter vinelandii AvOP	* Pseudomonas aeruginosa PAO1 Site: position = -167 score = 13.1383 sequence = ATTGAATC-(1)-GTGTCAAT-(6)-TTTGACCG Gene: PA2101: Permease of the drug/metabolite transporter (DMT) superfamily	Pseudomonas entomophila L48	* Pseudomonas fluorescens Pf-5 Site: position = -128 score = 13.7151 sequence = ATTGACAC-(1)-GTGTCAAT-(6)-TTTGACAG Gene: PFL_1866: Permease of the drug/metabolite transporter (DMT) superfamily	Pseudomonas mendocina ymp	Pseudomonas putida KT2440	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Permease of the drug/metabolite transporter (DMT) superfamily
COG1310	Azotobacter vinelandii AvOP	Pseudomonas aeruginosa PAO1 Gene: PA2102: Predicted metal-dependent protease of the PAD1/JAB1 superfamily	Pseudomonas entomophila L48	Pseudomonas fluorescens Pf-5	Pseudomonas mendocina ymp	Pseudomonas putida KT2440	Pseudomonas stutzeri A1501	Pseudomonas syringae pv. tomato str. DC3000	Predicted metal-dependent protease of the PAD1/JAB1 superfamily

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --