Regulog YcxD - Clostridia-1
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Multidrug efflux |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-1
- By TF family - GntR/MocR
- By pathway - Multidrug efflux
| Genome | Genes | Operons |
|---|---|---|
| Clostridium acetobutylicum ATCC 824 | ||
| Clostridium beijerincki NCIMB 8052 | 1 | 1 |
| Clostridium butyricum 5521 | ||
| Clostridium botulinum A str. ATCC 3502 | 1 | 1 |
| Clostridium kluyveri DSM 555 | ||
| Clostridium novyi NT | ||
| Clostridium perfringens ATCC 13124 | ||
| Clostridium tetani E88 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| celF |
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Clostridium beijerincki NCIMB 8052 Site: position = -273 score = 10.4823 sequence = AACTGTACT-(0)-AGTACAGTT-(12)-TATTGAATA Gene: Cbei_4036: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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Gene: CBO3360: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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6-phospho-beta-glucosidase (EC 3.2.1.86) |
| CRON 2. | |||||||||
| ycxC |
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Clostridium botulinum A str. ATCC 3502 Site: position = -127 score = 13.6312 sequence = ACCTGTACC-(0)-GGTATAGAT-(12)-TATTGTACC Gene: CBO2013: DMT superfamily drug/metabolite transporter |
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DMT superfamily drug/metabolite transporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |