Regulog YcxD - Bacillales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Multidrug efflux
Effector:
Phylum:	Firmicutes
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Bacillus amyloliquefaciens FZB42	1	1
Bacillus halodurans C-125
Bacillus clausii KSM-K16
Bacillus cereus ATCC 14579
Bacillus pumilus SAFR-032	1	1
Bacillus licheniformis DSM 13	1	1
Bacillus subtilis subsp. subtilis str. 168	1	1
Geobacillus kaustophilus HTA426
Oceanobacillus iheyensis HTE831
Paenibacillus sp. JDR-2	1	1
Anoxybacillus flavithermus WK1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
ycxC	* Bacillus amyloliquefaciens FZB42 Site: position = -107 score = 13.2666 sequence = ATCTGTACC-(0)-GGTACAGTT-(12)-CATTGTACT Gene: RBAM_003720: DMT superfamily drug/metabolite transporter	Bacillus halodurans C-125	Bacillus clausii KSM-K16	Bacillus cereus ATCC 14579	* Bacillus pumilus SAFR-032 Site: position = -120 score = 12.9271 sequence = CCTTGTACC-(0)-GGTACAGAT-(12)-TATTGTACA Gene: BPUM_0325: DMT superfamily drug/metabolite transporter	* Bacillus licheniformis DSM 13 Site: position = -118 score = 13.428 sequence = ATCTGTAAC-(0)-GGTACAGAT-(12)-TATTGTATC Gene: BLi00405: DMT superfamily drug/metabolite transporter	* Bacillus subtilis subsp. subtilis str. 168 Site: position = -109 score = 13.1917 sequence = TTTTGTACC-(0)-GGTACAGTT-(12)-CATTGTACC Gene: BSU03550: DMT superfamily drug/metabolite transporter	Geobacillus kaustophilus HTA426	Oceanobacillus iheyensis HTE831	* Paenibacillus sp. JDR-2 Site: position = -123 score = 10.9366 sequence = AACTGTATC-(0)-GATACAGTT-(12)-CGTTGTTTG Gene: Pjdr2_0545: DMT superfamily drug/metabolite transporter	Anoxybacillus flavithermus WK1	DMT superfamily drug/metabolite transporter

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --