Regulog TauR2 - Rhizobiales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 3 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - GntR/MocR

Statistics of regulated genes
Genome	Genes	Operons
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp. BTAi1
Nitrobacter winogradskyi Nb-255
Rhodopseudomonas palustris CGA009	10	3
Bartonella quintana str. Toulouse
Brucella melitensis 16M
Rhizobium etli CFN 42
Agrobacterium tumefaciens str. C58 (Cereon)
Azorhizobium caulinodans ORS 571
Rhizobium leguminosarum bv. viciae 3841
Rhizobium sp. NGR234
Sinorhizobium meliloti 1021
Xanthobacter autotrophicus Py2
Mesorhizobium loti MAFF303099
Mesorhizobium sp. BNC1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
TauR2	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	* Rhodopseudomonas palustris CGA009 Site: position = -186 score = 7.10048 sequence = CTAGCGCCAG-(13)-ATGGAGCCAG Gene: RPA0105: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

CRON 2.
betB COG1012 (PutA)	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	* Rhodopseudomonas palustris CGA009 Site: position = -64 score = 7.48108 sequence = CTGGCCCAAT-(13)-CTGGACCTTC Gene: RPA0112: Betaine aldehyde dehydrogenase (EC 1.2.1.8)	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Betaine aldehyde dehydrogenase (EC 1.2.1.8)
COG0730	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Rhodopseudomonas palustris CGA009 Gene: RPA0111: Predicted permease, protein of unknown function DUF81	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Predicted permease, protein of unknown function DUF81

CRON 3.
COG1574	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	* Rhodopseudomonas palustris CGA009 Site: position = -85 score = 9.33624 sequence = CTGGCTCCAT-(13)-CTGGCGCTAG Gene: RPA0104: Amidohydrolase	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Amidohydrolase
COG0523	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Rhodopseudomonas palustris CGA009 Gene: RPA0103: Cobalamin synthesis protein/P47K	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Cobalamin synthesis protein/P47K
oppA	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Rhodopseudomonas palustris CGA009 Gene: RPA0102: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
oppB	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Rhodopseudomonas palustris CGA009 Gene: RPA0101: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)
oppC	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Rhodopseudomonas palustris CGA009 Gene: RPA0100: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
oppD	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Rhodopseudomonas palustris CGA009 Gene: RPA0099: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
oppF	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Nitrobacter winogradskyi Nb-255	Rhodopseudomonas palustris CGA009 Gene: RPA0098: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	Bartonella quintana str. Toulouse	Brucella melitensis 16M	Rhizobium etli CFN 42	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog TauR2 - Rhizobiales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --