Regulog ArcR - Staphylococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Arginine degradation |
| Effector: | Arginine |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - CRP
- By effector - Arginine
- By pathway - Arginine degradation
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 5 | 1 |
| Staphylococcus capitis SK14 | 5 | 1 |
| Staphylococcus epidermidis ATCC 12228 | 7 | 2 |
| Staphylococcus carnosus subsp. carnosus TM300 | 3 | 1 |
| Staphylococcus haemolyticus JCSC1435 | 3 | 1 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | ||
| Macrococcus caseolyticus JCSC5402 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| arcA |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -79 score = 6.44614 sequence = ATGTGAATATAATCACAT Gene: SA2428: arginine deiminase |
*
Staphylococcus capitis SK14 Site: position = -77 score = 6.27914 sequence = TTGTGAATATAATCACAT Gene: STACA0001_1845: arginine deiminase |
*2
Staphylococcus epidermidis ATCC 12228 Site: position = -76 score = 5.41855 sequence = ATGTGATAATCATCACGA Gene: SE2217: arginine deiminase Site: position = -76 score = 5.61951 sequence = TTGTGAATTAAATCACAC Gene: SE0106: arginine deiminase |
*
Staphylococcus carnosus subsp. carnosus TM300 Site: position = -74 score = 6.3989 sequence = ATGTGATTTTAATCACAT Gene: Sca_2085: arginine deiminase |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -76 score = 5.86939 sequence = ATGTGAAAACAATCACAT Gene: SH0367: arginine deiminase |
|
|
arginine deiminase |
| arcB |
Gene: SA2427: ornithine carbamoyltransferase |
Gene: STACA0001_1844: ornithine carbamoyltransferase |
2
Staphylococcus epidermidis ATCC 12228 Gene: SE2216: ornithine carbamoyltransferase Gene: SE0103: ornithine carbamoyltransferase |
|
|
|
|
ornithine carbamoyltransferase |
| arcD |
Gene: SA2426: arginine/ornithine antiporter |
Gene: STACA0001_1843: arginine/ornithine antiporter |
2
Staphylococcus epidermidis ATCC 12228 Gene: SE2215: arginine/ornithine antiporter Gene: SE0105: arginine/ornithine antiporter |
Gene: Sca_2084: arginine/ornithine antiporter |
Gene: SH0368: arginine/ornithine antiporter |
|
|
arginine/ornithine antiporter |
| arcC |
Gene: SA2425: carbamate kinase |
Gene: STACA0001_1842: carbamate kinase |
Gene: SE0102: carbamate kinase |
|
|
|
|
carbamate kinase |
| arcR |
Gene: SA2424: transcription regulator of arginine catabolism, Crp/Fnr family |
Gene: STACA0001_1841: transcription regulator of arginine catabolism, Crp/Fnr family |
2
Staphylococcus epidermidis ATCC 12228 Gene: SE2214: transcription regulator of arginine catabolism, Crp/Fnr family Gene: SE0104: transcription regulator of arginine catabolism, Crp/Fnr family |
Gene: Sca_2083: transcription regulator of arginine catabolism, Crp/Fnr family |
Gene: SH0369: transcription regulator of arginine catabolism, Crp/Fnr family |
|
|
transcription regulator of arginine catabolism, Crp/Fnr family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |