Regulog AcnR - Mycobacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | |
| Biological process: | Tricarboxylic acid cycle |
| Effector: | Citrate |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Mycobacteriaceae
- By trascription factor - AcnR
- By TF family - TetR
- By effector - Citrate
- By pathway - Tricarboxylic acid cycle
| Genome | Genes | Operons |
|---|---|---|
| Mycobacterium abscessus ATCC 19977 | 3 | 2 |
| Mycobacterium avium 104 | 3 | 2 |
| Mycobacterium flavescens PYR-GCK | 3 | 2 |
| Mycobacterium leprae TN | 1 | 1 |
| Mycobacterium marinum M | 2 | 1 |
| Mycobacterium smegmatis str. MC2 155 | 3 | 2 |
| Mycobacterium sp. JLS | 3 | 2 |
| Mycobacterium tuberculosis H37Rv | 2 | 1 |
| Mycobacterium vanbaalenii PYR-1 | 3 | 2 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| aceA |
*
Mycobacterium abscessus ATCC 19977 Site: position = -259 score = 5.29545 sequence = CAGTACGAGCGTTCTG Gene: MAB_4095c: Isocitrate lyase (EC 4.1.3.1) |
*
Mycobacterium avium 104 Site: position = -268 score = 5.19499 sequence = CAGTACAAGCGTCCGG Gene: MAV_4682: Isocitrate lyase (EC 4.1.3.1) |
*
Mycobacterium flavescens PYR-GCK Site: position = -266 score = 5.29545 sequence = CAGTACGGGCGTACTG Gene: Mflv_0107: Isocitrate lyase (EC 4.1.3.1) |
|
Gene: MMAR_0792: Isocitrate lyase (EC 4.1.3.1) |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -233 score = 5.29545 sequence = CAGTACGGGCGTACTG Gene: MSMEG_0911: Isocitrate lyase (EC 4.1.3.1) |
*
Mycobacterium sp. JLS Site: position = -252 score = 5.29545 sequence = CAGTACGGGCGTACTG Gene: Mjls_0629: Isocitrate lyase (EC 4.1.3.1) |
Gene: Rv0467: Isocitrate lyase (EC 4.1.3.1) |
*
Mycobacterium vanbaalenii PYR-1 Site: position = -251 score = 5.78986 sequence = CAGTACAAGCGTACTG Gene: Mvan_0801: Isocitrate lyase (EC 4.1.3.1) |
Isocitrate lyase (EC 4.1.3.1) |
| CRON 2. | ||||||||||
| acnA |
*
Mycobacterium abscessus ATCC 19977 Site: position = -44 score = 5.42278 sequence = CGGGACAAGCGTACTG Gene: MAB_2730: Aconitate hydratase (EC 4.2.1.3) |
*
Mycobacterium avium 104 Site: position = -79 score = 5.78986 sequence = CAGGACAAGCGTACTG Gene: MAV_3303: Aconitate hydratase (EC 4.2.1.3) |
*
Mycobacterium flavescens PYR-GCK Site: position = -77 score = 5.78986 sequence = CAGGACAAGCGTACTG Gene: Mflv_3665: Aconitate hydratase (EC 4.2.1.3) |
*
Mycobacterium leprae TN Site: position = -80 score = 5.78986 sequence = CAGGACAAGCGTACTG Gene: ML1814: Aconitate hydratase (EC 4.2.1.3) |
*
Mycobacterium marinum M Site: position = -109 score = 5.78986 sequence = CAGGACAAGCGTACTG Gene: MMAR_2282: Aconitate hydratase (EC 4.2.1.3) |
*
Mycobacterium smegmatis str. MC2 155 Site: position = -74 score = 5.78986 sequence = CAGGACAAGCGTACTG Gene: MSMEG_3143: Aconitate hydratase (EC 4.2.1.3) |
*
Mycobacterium sp. JLS Site: position = -74 score = 5.55285 sequence = CAGGACAAACGTACTG Gene: Mjls_2486: Aconitate hydratase (EC 4.2.1.3) |
*
Mycobacterium tuberculosis H37Rv Site: position = -80 score = 5.78986 sequence = CAGGACAAGCGTACTG Gene: Rv1475c: Aconitate hydratase (EC 4.2.1.3) |
*
Mycobacterium vanbaalenii PYR-1 Site: position = -78 score = 5.42278 sequence = CAGGACAAGCGTACCG Gene: Mvan_2745: Aconitate hydratase (EC 4.2.1.3) |
Aconitate hydratase (EC 4.2.1.3) |
| acnR |
Gene: MAB_2731: Aconitase gene transcriptional regulator AcnR, TetR family |
Gene: MAV_3305: Aconitase gene transcriptional regulator AcnR, TetR family |
Gene: Mflv_3666: Aconitase gene transcriptional regulator AcnR, TetR family |
|
Gene: MMAR_2281: Aconitase gene transcriptional regulator AcnR, TetR family |
Gene: MSMEG_3142: Aconitase gene transcriptional regulator AcnR, TetR family |
Gene: Mjls_2485: Aconitase gene transcriptional regulator AcnR, TetR family |
Gene: Rv1474c: Aconitase gene transcriptional regulator AcnR, TetR family |
Gene: Mvan_2744: Aconitase gene transcriptional regulator AcnR, TetR family |
Aconitase gene transcriptional regulator AcnR, TetR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |