Regulog CsoR - Listeriaceae
| Regulator type: | Transcription factor |
| Regulator family: | CsoR |
| Regulation mode: | repressor |
| Biological process: | Copper resistance |
| Effector: | Copper ion, (Cu+) |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Listeriaceae
- By trascription factor - CsoR
- By TF family - CsoR
- By effector - Copper ion, (Cu+)
- By pathway - Copper resistance
| Genome | Genes | Operons |
|---|---|---|
| Listeria monocytogenes EGD-e | 3 | 1 |
| Listeria seeligeri serovar 1/2b str. SLCC3954 | 3 | 1 |
| Listeria welshimeri serovar 6b str. SLCC5334 | 3 | 1 |
| Listeria innocua Clip11262 | 3 | 1 |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| csoR |
*
Listeria monocytogenes EGD-e Site: position = -50 score = 7.14143 sequence = ATACCTATAGGGGGTAT Gene: lmo1854: Copper-sensing transcriptional repressor |
*
Listeria seeligeri serovar 1/2b str. SLCC3954 Site: position = -50 score = 7.14143 sequence = ATACCTATAGGGGGTAT Gene: lse_1834: Copper-sensing transcriptional repressor |
*
Listeria welshimeri serovar 6b str. SLCC5334 Site: position = -50 score = 7.14143 sequence = ATACCTATAGGGGGTAT Gene: lwe1873: Copper-sensing transcriptional repressor |
*
Listeria innocua Clip11262 Site: position = -50 score = 7.14143 sequence = ATACCTATAGGGGGTAT Gene: lin1968: Copper-sensing transcriptional repressor |
Copper-sensing transcriptional repressor |
| copA |
Gene: lmo1853: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: lse_1833: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: lwe1872: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: lin1967: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Copper-translocating P-type ATPase (EC 3.6.3.4) |
| copZ |
Gene: lmo1852: Copper chaperone |
Gene: lse_1832: Copper chaperone |
Gene: lwe1871: Copper chaperone |
Gene: lin1966: Copper chaperone |
Copper chaperone |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |