Regulog DasR - Micrococcineae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:	repressor
Biological process:	N-acetylglucosamine utilization
Effector:	Glucosamine-6-phosphate
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 22 sites [see more]

Member of regulog collections

By taxonomy - Micrococcineae
By trascription factor - DasR
By TF family - GntR/Others
By effector - Glucosamine-6-phosphate
By pathway - N-acetylglucosamine utilization

Statistics of regulated genes
Genome	Genes	Operons
Arthrobacter aurescens TC1	8	5
Arthrobacter chlorophenolicus A6	2	2
Arthrobacter sp. FB24	8	5
Beutenbergia cavernae DSM 12333	6	2
Brachybacterium faecium DSM 4810
Brevibacterium linens BL2
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Janibacter sp. HTCC2649
Jonesia denitrificans DSM 20603
Kocuria rhizophila DC2201
Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07
Renibacterium salmoninarum ATCC 33209
Tropheryma whipplei str. Twist

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
nagT	* Arthrobacter aurescens TC1 Site: position = -160 score = 4.00287 sequence = CTAGGTATAGACCAAA Site: position = -183 score = 4.14498 sequence = AAAGGACTAGACCAAA Gene: AAur_4092: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810 Gene: Bfae_25450: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	2 Leifsonia xyli subsp. xyli str. CTCB07 Gene: Lxx02590: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein Gene: Lxx17410: N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein
nagU	Arthrobacter aurescens TC1 Gene: AAur_4091: N-Acetyl-D-glucosamine ABC transport system, permease protein 1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810 Gene: Bfae_25440: N-Acetyl-D-glucosamine ABC transport system, permease protein 1	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07 Gene: Lxx02600: N-Acetyl-D-glucosamine ABC transport system, permease protein 1	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	N-Acetyl-D-glucosamine ABC transport system, permease protein 1
nagV	Arthrobacter aurescens TC1 Gene: AAur_4090: N-Acetyl-D-glucosamine ABC transport system, permease protein 2	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810 Gene: Bfae_25430: N-Acetyl-D-glucosamine ABC transport system, permease protein 2	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07 Gene: Lxx02610: N-Acetyl-D-glucosamine ABC transport system, permease protein 2	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	N-Acetyl-D-glucosamine ABC transport system, permease protein 2
hex	Arthrobacter aurescens TC1 Gene: AAur_4089: Beta-hexosaminidase (EC 3.2.1.52)	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Beta-hexosaminidase (EC 3.2.1.52)

CRON 2.
nagE	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	* Arthrobacter sp. FB24 Site: position = -80 score = 4.68263 sequence = ACTGGTTATAACCAGT Site: position = -195 score = 4.15933 sequence = TTTGGACATGTCCACT Gene: Arth_3514: N-acetylglucosamine-specific phosphotransferase system IIC component	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547 Gene: Ksed_16900: N-acetylglucosamine-specific phosphotransferase system IIC component	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	N-acetylglucosamine-specific phosphotransferase system IIC component
nagA	Arthrobacter aurescens TC1 Gene: AAur_2589: N-acetylglucosamine-6-phosphate deacetylase	2 Arthrobacter chlorophenolicus A6 Gene: Achl_3426: N-acetylglucosamine-6-phosphate deacetylase Gene: Achl_3394: N-acetylglucosamine-6-phosphate deacetylase	3 Arthrobacter sp. FB24 Gene: Arth_3513: N-acetylglucosamine-6-phosphate deacetylase Gene: Arth_0181: N-acetylglucosamine-6-phosphate deacetylase Gene: Arth_1713: N-acetylglucosamine-6-phosphate deacetylase	Beutenbergia cavernae DSM 12333 Gene: Bcav_1314: N-acetylglucosamine-6-phosphate deacetylase	Brachybacterium faecium DSM 4810 Gene: Bfae_19100: N-acetylglucosamine-6-phosphate deacetylase	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649 Gene: JNB_12364: N-acetylglucosamine-6-phosphate deacetylase	Jonesia denitrificans DSM 20603 Gene: Jden_0226: N-acetylglucosamine-6-phosphate deacetylase	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547 Gene: Ksed_16890: N-acetylglucosamine-6-phosphate deacetylase	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_1452: N-acetylglucosamine-6-phosphate deacetylase	Tropheryma whipplei str. Twist	N-acetylglucosamine-6-phosphate deacetylase
nagB	Arthrobacter aurescens TC1 Gene: AAur_2579: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Arthrobacter chlorophenolicus A6 Gene: Achl_2322: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	2 Arthrobacter sp. FB24 Gene: Arth_3512: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) Gene: Arth_2590: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Beutenbergia cavernae DSM 12333 Gene: Bcav_2749: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Brachybacterium faecium DSM 4810 Gene: Bfae_13500: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Brevibacterium linens BL2 Gene: BlinB01003539: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0237: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_1463: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)	Tropheryma whipplei str. Twist	Glucosamine-6-phosphate deaminase (EC 3.5.99.6)

CRON 3.
nagE_A	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	* Arthrobacter sp. FB24 Site: position = -187 score = 4.68263 sequence = ACTGGTTATAACCAGT Site: position = -72 score = 4.15933 sequence = AGTGGACATGTCCAAA Gene: Arth_3516: PTS system N-acetylglucosamine-specific EIIA component	Beutenbergia cavernae DSM 12333 Gene: Bcav_2632: PTS system N-acetylglucosamine-specific EIIA component	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0939: PTS system N-acetylglucosamine-specific EIIA component	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547 Gene: Ksed_16940: PTS system N-acetylglucosamine-specific EIIA component	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	PTS system N-acetylglucosamine-specific EIIA component
dasR	2 Arthrobacter aurescens TC1* Site: position = -65 score = 5.01771 sequence = ACTGGTCTAGACCTCC Gene: AAur_2211: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family Site: position = -38 score = 5.08935 sequence = ATTGGTTTAGACCAAC Site: position = -14 score = 4.59181 sequence = ATTGGCATAGACCAAT Gene: AAur_2055: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family	* Arthrobacter chlorophenolicus A6 Site: position = -56 score = 4.92576 sequence = GCTGGTCTAGACCTGA Gene: Achl_1950: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family	2 Arthrobacter sp. FB24* Site: position = -66 score = 4.95902 sequence = GGTGGTCTAGACCTGC Gene: Arth_2213: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family Gene: Arth_3517: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family	* Beutenbergia cavernae DSM 12333 Site: position = -154 score = 4.75448 sequence = ATAGGTCTAGTCCACT Site: position = -34 score = 4.48399 sequence = TCTGGTCCAGACCACT Gene: Bcav_0433: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649 Gene: JNB_15393: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209 Gene: RSal33209_1580: Transcriptional regulator of N-Acetylglucosamine utilization, GntR family	Tropheryma whipplei str. Twist	Transcriptional regulator of N-Acetylglucosamine utilization, GntR family
nagE_B	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	* Arthrobacter sp. FB24 Site: position = -7 score = 4.15933 sequence = AGTGGACATGTCCAAA Site: position = -122 score = 4.68263 sequence = ACTGGTTATAACCAGT Gene: Arth_3515: PTS system N-acetylglucosamine-specific EIIB component	Beutenbergia cavernae DSM 12333 Gene: Bcav_2635: PTS system N-acetylglucosamine-specific EIIB component	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0938: PTS system N-acetylglucosamine-specific EIIB component	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547 Gene: Ksed_16930: PTS system N-acetylglucosamine-specific EIIB component	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	PTS system N-acetylglucosamine-specific EIIB component

CRON 4.
namT	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	* Beutenbergia cavernae DSM 12333 Site: position = -232 score = 4.48399 sequence = AGTGGTCTGGACCAGA Site: position = -112 score = 4.75448 sequence = AGTGGACTAGACCTAT Gene: Bcav_0434: Predicted N-acetylmannosamine ABC transport system, sugar-binding protein	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0234: Predicted N-acetylmannosamine ABC transport system, sugar-binding protein	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Predicted N-acetylmannosamine ABC transport system, sugar-binding protein
namU	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333 Gene: Bcav_0435: Predicted N-acetylmannosamine ABC transport system, permease 1	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0235: Predicted N-acetylmannosamine ABC transport system, permease 1	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Predicted N-acetylmannosamine ABC transport system, permease 1
namV	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333 Gene: Bcav_0436: Predicted N-acetylmannosamine ABC transport system, permease 2	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0236: Predicted N-acetylmannosamine ABC transport system, permease 2	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Predicted N-acetylmannosamine ABC transport system, permease 2
nanE	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333 Gene: Bcav_0437: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
nanK	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333 Gene: Bcav_0438: N-acetylmannosamine kinase (EC 2.7.1.60)	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603 Gene: Jden_0238: N-acetylmannosamine kinase (EC 2.7.1.60)	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	N-acetylmannosamine kinase (EC 2.7.1.60)

CRON 5.
nagK2	* Arthrobacter aurescens TC1 Site: position = -281 score = 4.59181 sequence = ATTGGTCTATGCCAAT Site: position = -257 score = 5.08935 sequence = GTTGGTCTAAACCAAT Gene: AAur_2054: Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Predicted N-acetylglucosamine kinase, glucokinase-like (EC 2.7.1.59)

CRON 6.
ptsH	* Arthrobacter aurescens TC1 Site: position = -14 score = 5.01771 sequence = GGAGGTCTAGACCAGT Gene: AAur_2212: Phosphotransferase system, phosphocarrier protein HPr	* Arthrobacter chlorophenolicus A6 Site: position = -127 score = 4.92576 sequence = TCAGGTCTAGACCAGC Gene: Achl_1951: Phosphotransferase system, phosphocarrier protein HPr	* Arthrobacter sp. FB24 Site: position = -116 score = 4.95902 sequence = GCAGGTCTAGACCACC Gene: Arth_2214: Phosphotransferase system, phosphocarrier protein HPr	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Phosphotransferase system, phosphocarrier protein HPr

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog DasR - Micrococcineae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --