Statistics of regulated genes

Genome	Genes	Operons
Agrobacterium tumefaciens str. C58 (Cereon)
Azorhizobium caulinodans ORS 571	3	2
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110	1	1
Bradyrhizobium sp. BTAi1	1	1
Brucella melitensis 16M
Mesorhizobium loti MAFF303099	2	2
Mesorhizobium sp. BNC1	1	1
Nitrobacter winogradskyi Nb-255	1	1
Rhizobium etli CFN 42
Rhizobium leguminosarum bv. viciae 3841	1	1
Rhizobium sp. NGR234	3	2
Rhodopseudomonas palustris CGA009	1	1
Sinorhizobium meliloti 1021	4	4
Xanthobacter autotrophicus Py2	1	1

Clusters of co-Regulated Orthologous operoNs (CRONs)

Genes																Function
CRON 1.
SMc03253	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mlr6283: Predicted L-proline 3-hydroxylase	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	* Sinorhizobium meliloti 1021 Site: position = -355 score = 4.95918 sequence = CTAGGTAGTTTCCCTTAG Gene: SMc03253: Predicted L-proline 3-hydroxylase	Xanthobacter autotrophicus Py2	Predicted L-proline 3-hydroxylase
CRON 2.
nifA	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -114 score = 3.07455 sequence = CTCCGCGGTTTCCATTAT Gene: AZC_1049: Nitrogen fixation transcriptional regulator NifA, Fis family	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110 Gene: blr2037: Nitrogen fixation transcriptional regulator NifA, Fis family	Bradyrhizobium sp. BTAi1 Gene: BBta_5933: Nitrogen fixation transcriptional regulator NifA, Fis family	Brucella melitensis 16M	*2 Mesorhizobium loti MAFF303099 Site: position = -193 score = 3.10489 sequence = CTTCGGCGTTCTCTTCAA Gene: mll5857: Nitrogen fixation transcriptional regulator NifA, Fis family Gene: mll5837: Nitrogen fixation transcriptional regulator NifA, Fis family	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PD00228: Nitrogen fixation transcriptional regulator NifA, Fis family	* Rhizobium leguminosarum bv. viciae 3841 Site: position = -70 score = 3.48233 sequence = CTTAGGAATATGCGTTAG Gene: pRL100196: Nitrogen fixation transcriptional regulator NifA, Fis family	Rhizobium sp. NGR234 Gene: NGR_a01260: Nitrogen fixation transcriptional regulator NifA, Fis family	Rhodopseudomonas palustris CGA009 Gene: RPA4632: Nitrogen fixation transcriptional regulator NifA, Fis family	* Sinorhizobium meliloti 1021 Site: position = -154 score = 3.14249 sequence = TTACAAGAACCAACTTAC Gene: SMa0815: Nitrogen fixation transcriptional regulator NifA, Fis family	Xanthobacter autotrophicus Py2 Gene: Xaut_0082: Nitrogen fixation transcriptional regulator NifA, Fis family	Nitrogen fixation transcriptional regulator NifA, Fis family
AZC_1048	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571 Gene: AZC_1048: (FeS)4 cluster domain protein, co-localized with NifA	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	Rhizobium sp. NGR234	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	(FeS)4 cluster domain protein, co-localized with NifA
fixX	Agrobacterium tumefaciens str. C58 (Cereon)	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium sp. NGR234 Site: position = -18 score = 3.42864 sequence = CTAAAGGGGAGCATTGAG Gene: NGR_a01250: Ferredoxin-like protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021	Xanthobacter autotrophicus Py2	Ferredoxin-like protein
CRON 3.
fixK	Agrobacterium tumefaciens str. C58 (Cereon)	* Azorhizobium caulinodans ORS 571 Site: position = -118 score = 3.97564 sequence = CTCCGTAAAATCACCTAC Site: position = -104 score = 4.60637 sequence = CTACGCAATACTACTTAA Site: position = -90 score = 3.72939 sequence = TTAAGGGCTGGGCCCTAA Gene: AZC_4653: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	Bartonella quintana str. Toulouse	*4 Bradyrhizobium japonicum USDA 110 Gene: bll2109: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family Gene: bll3466: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family Gene: bll7696: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family Site: position = -93 score = 5.05223 sequence = CTACGGGGTTCTACGTAA Site: position = -79 score = 4.16308 sequence = GTAAGGCACCCCCCTTAA Gene: bll2757: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	*5 Bradyrhizobium sp. BTAi1 Gene: BBta_p0192: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family Gene: BBta_7770: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family Gene: BBta_7766: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family Gene: BBta_7767: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family Site: position = -102 score = 4.45272 sequence = CTACGTATATCTACGTAA Site: position = -88 score = 4.47452 sequence = GTAAGGGAACGTCCTTAA Gene: BBta_2786: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -89 score = 4.86332 sequence = CTAGGTAGTTTCCCGTAG Gene: mll6578: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	* Mesorhizobium sp. BNC1 Site: position = -86 score = 5.15919 sequence = CTACGTAGTTTCCCTTAG Gene: Meso_2220: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	* Nitrobacter winogradskyi Nb-255 Site: position = -102 score = 4.59818 sequence = CTCCGTAAGACCCCTTAG Site: position = -88 score = 4.04155 sequence = TTAGGAGGCTGCCCTTAG Gene: Nwi_1036: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	Rhizobium etli CFN 42	Rhizobium leguminosarum bv. viciae 3841	* Rhizobium sp. NGR234 Site: position = -89 score = 4.51255 sequence = CTACGGGGAATCCCGCAA Gene: NGR_b00800: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	* Rhodopseudomonas palustris CGA009 Site: position = -105 score = 5.08636 sequence = CTACGTAGACCTACTTAG Site: position = -91 score = 4.73872 sequence = TTAGGGGAACCCACTTAA Gene: RPA4250: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	*3 Sinorhizobium meliloti 1021 Site: position = -87 score = 4.78565 sequence = CTAAGTAGTTCCCTTTAG Gene: SMa0762: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family Gene: SMa0662: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family Site: position = -87 score = 5.18727 sequence = CTAAGTAATTTCCCTTAG Gene: SMa1225: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	* Xanthobacter autotrophicus Py2 Site: position = -104 score = 4.58862 sequence = CTCCGTAAAACTACTTAA Site: position = -90 score = 4.4863 sequence = TTAAGGGCACCGACTTAA Gene: Xaut_1746: Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family	Nitrogen fixation and oxygen response transcriptional regulator FixK, Crp family

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