Regulog NagR - Enterococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | N-acetylglucosamine utilization |
| Effector: | N-acetylglucosamine-6-phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterococcaceae
- By TF family - GntR/Others
- By effector - N-acetylglucosamine-6-phosphate
- By pathway - N-acetylglucosamine utilization
| Genome | Genes | Operons |
|---|---|---|
| Enterococcus faecalis V583 | 7 | 7 |
| Enterococcus faecium DO | 3 | 3 |
| Genes | Function | ||
|---|---|---|---|
| CRON 1. | |||
| nagR |
*
Enterococcus faecalis V583 Site: position = -58 score = 4.96228 sequence = TACACGGTCTATACCAGTTA Gene: EF1328: Transcriptional regulator, GntR family |
|
Transcriptional regulator, GntR family |
| CRON 2. | |||
| fbp |
*
Enterococcus faecalis V583 Site: position = -37 score = 5.23602 sequence = AAATTGGTATATACGAAAAA Gene: EF1503: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
*
Enterococcus faecium DO Site: position = -34 score = 4.20972 sequence = AATGTTGAGTATACCAATTT Site: position = -113 score = 5.02498 sequence = TTTTTTGTATAGACCTATTT Gene: EfaeDRAFT_1936: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
| CRON 3. | |||
| glmS |
*
Enterococcus faecalis V583 Site: position = -338 score = 4.92593 sequence = TTAAAGAACTAGACCAATTT Gene: EF2151: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
*
Enterococcus faecium DO Site: position = -303 score = 5.54621 sequence = AATTTGATATATACCAATTT Gene: EfaeDRAFT_1422: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16) |
| CRON 4. | |||
| nagB |
*
Enterococcus faecalis V583 Site: position = -42 score = 5.61652 sequence = TAATTGGACTATACCAAAAT Gene: EF0466: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Gene: EfaeDRAFT_1401: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
Glucosamine-6-phosphate deaminase (EC 3.5.99.6) |
| CRON 5. | |||
| glmU |
*2
Enterococcus faecalis V583 Site: position = -194 score = 4.93405 sequence = AAAATGGTCCATTCCATTTT Gene: EF0059: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) Gene: EF2569: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
Gene: EfaeDRAFT_1585: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157) |
| CRON 6. | |||
| nagA |
*
Enterococcus faecalis V583 Site: position = -82 score = 4.55718 sequence = TAAAAGGTCTACACCATTTC Gene: EF1317: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
*
Enterococcus faecium DO Site: position = -78 score = 4.78402 sequence = TAAATGGTGTAGACCATTCT Gene: EfaeDRAFT_0059: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) |
| CRON 7. | |||
| pgi |
*
Enterococcus faecalis V583 Site: position = -92 score = 4.18446 sequence = CAATTGGTCTATCCAAAAGA Gene: EF1416: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Gene: EfaeDRAFT_1053: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Glucose-6-phosphate isomerase (EC 5.3.1.9) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |