Regulog ArsR - Mycobacteriaceae
| Regulator type: | Transcription factor |
| Regulator family: | ArsR |
| Regulation mode: | repressor |
| Biological process: | Arsenic resistance |
| Effector: | Arsenite; Arsenate |
| Phylum: | Actinobacteria |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Mycobacteriaceae
- By TF family - ArsR
- By effector - Arsenite
- By effector - Arsenate
- By pathway - Arsenic resistance
| Genome | Genes | Operons |
|---|---|---|
| Mycobacterium abscessus ATCC 19977 | 6 | 2 |
| Mycobacterium avium 104 | ||
| Mycobacterium flavescens PYR-GCK | 5 | 3 |
| Mycobacterium leprae TN | ||
| Mycobacterium marinum M | 3 | 1 |
| Mycobacterium sp. JLS | 6 | 2 |
| Mycobacterium tuberculosis H37Rv | 3 | 2 |
| Mycobacterium vanbaalenii PYR-1 | 1 | 1 |
| Mycobacterium smegmatis str. MC2 155 | 4 | 2 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| arsR |
*
Mycobacterium abscessus ATCC 19977 Site: position = -9 score = 4.9038 sequence = TATCGATGTATGTCGAAT Gene: MAB_4862: Arsenic resistance transcriptional regulator ArsR, ArsR family |
|
*
Mycobacterium flavescens PYR-GCK Site: position = 10 score = 5.57953 sequence = TTTCGATATATGTCAATA Gene: Mflv_3471: Arsenic resistance transcriptional regulator ArsR, ArsR family |
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Gene: MMAR_2056: Arsenic resistance transcriptional regulator ArsR, ArsR family |
*2
Mycobacterium sp. JLS Site: position = -25 score = 5.72506 sequence = TATCGATAACTGTCAATA Site: position = -9 score = 5.4953 sequence = TATCGATGTATGTCGAAA Gene: Mjls_1441: Arsenic resistance transcriptional regulator ArsR, ArsR family Site: position = -25 score = 5.37044 sequence = CATTGATCAACGTCAATA Site: position = -9 score = 4.9038 sequence = TATCGATGTATGTCGAAT Gene: Mjls_4906: Arsenic resistance transcriptional regulator ArsR, ArsR family |
*
Mycobacterium tuberculosis H37Rv Site: position = -9 score = 5.03079 sequence = TATTGATGTATGTCGAAT Gene: Rv2642: Arsenic resistance transcriptional regulator ArsR, ArsR family |
|
*2
Mycobacterium smegmatis str. MC2 155 Site: position = -81 score = 4.86105 sequence = TTTCGACATATGTCGAAC Site: position = -37 score = 5.57953 sequence = TTTCGATATATGTCAATA Gene: MSMEG_1175: Arsenic resistance transcriptional regulator ArsR, ArsR family Site: position = -25 score = 6.1356 sequence = TATCGATATATGTCAATA Gene: MSMEG_1173: Arsenic resistance transcriptional regulator ArsR, ArsR family |
Arsenic resistance transcriptional regulator ArsR, ArsR family |
| arsB |
2
Mycobacterium abscessus ATCC 19977 Gene: MAB_2567: Arsenite efflux membrane protein Gene: MAB_4863: Arsenite efflux membrane protein |
|
Gene: Mflv_3469: Arsenite efflux membrane protein |
|
Gene: MMAR_2055: Arsenite efflux membrane protein |
2
Mycobacterium sp. JLS Gene: Mjls_4905: Arsenite efflux membrane protein Gene: Mjls_1442: Arsenite efflux membrane protein |
Gene: Rv2643: Arsenite efflux membrane protein |
|
Gene: MSMEG_1172: Arsenite efflux membrane protein |
Arsenite efflux membrane protein |
| arsC |
2
Mycobacterium abscessus ATCC 19977 Gene: MAB_4864: Arsenate reductase (EC 1.20.4.1) Gene: MAB_2568: Arsenate reductase (EC 1.20.4.1) |
|
Gene: Mflv_3468: Arsenate reductase (EC 1.20.4.1) |
|
|
2
Mycobacterium sp. JLS Gene: Mjls_1443: Arsenate reductase (EC 1.20.4.1) Gene: Mjls_1444: Arsenate reductase (EC 1.20.4.1) |
|
|
Gene: MSMEG_1171: Arsenate reductase (EC 1.20.4.1) |
Arsenate reductase (EC 1.20.4.1) |
| PF00903 |
*
Mycobacterium abscessus ATCC 19977 Site: position = -83 score = 4.55895 sequence = GTTTGACATATGTCAAAG Gene: MAB_2566: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily |
|
*2
Mycobacterium flavescens PYR-GCK Site: position = -79 score = 5.85204 sequence = CATTGACATATGTCGAAA Gene: Mflv_1653: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Site: position = -82 score = 6.00861 sequence = TATTGACATATATCGAAA Gene: Mflv_3470: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily |
|
*
Mycobacterium marinum M Site: position = -82 score = 5.56849 sequence = CCTTGACATATATCAAAA Gene: MMAR_2057: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily |
|
*
Mycobacterium tuberculosis H37Rv Site: position = -82 score = 4.97699 sequence = CCTTGACATATATCAAAG Site: position = -37 score = 4.87422 sequence = TTTTGATATAAGTCAAAC Gene: Rv2641: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily |
*
Mycobacterium vanbaalenii PYR-1 Site: position = -80 score = 5.57953 sequence = TGTTGACATATATCAAAA Gene: Mvan_4826: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily |
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Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |