Regulog SPOA0375 - Rhodobacterales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
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| Phylum: | Proteobacteria/Alpha |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - GntR/Others
| Genome | Genes | Operons |
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| Hyphomonas neptunium ATCC 15444 | ||
| Jannaschia sp. CCS1 | ||
| Loktanella vestfoldensis SKA53 | ||
| Oceanicaulis alexandrii HTCC2633 | ||
| Oceanicola batsensis HTCC2597 | ||
| Oceanicola granulosus HTCC2516 | ||
| Paracoccus denitrificans PD1222 | ||
| Rhodobacter sphaeroides 2.4.1 | ||
| Rhodobacterales bacterium HTCC2654 | ||
| Roseobacter sp. MED193 | ||
| Roseovarius nubinhibens ISM | ||
| Roseovarius sp. 217 | 5 | 2 |
| Silicibacter TM1040 | ||
| Silicibacter pomeroyi DSS-3 | 5 | 2 |
| Sulfitobacter sp. EE-36 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| ROS217_02040 |
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Roseovarius sp. 217 Site: position = -139 score = 9.19225 sequence = CTGTCCCCTT-(12)-CTGTCCCTTC Gene: ROS217_02040: TRAP-type C4-dicarboxylate transport system, periplasmic component |
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Silicibacter pomeroyi DSS-3 Site: position = -96 score = 8.79108 sequence = CTGTCACCCG-(12)-CTGTCACTTT Gene: SPOA0374: TRAP-type C4-dicarboxylate transport system, periplasmic component |
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TRAP-type C4-dicarboxylate transport system, periplasmic component |
| ROS217_02045 |
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Gene: ROS217_02045: TRAP-type C4-dicarboxylate transport system, large permease component |
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Gene: SPOA0373: TRAP-type C4-dicarboxylate transport system, large permease component |
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TRAP-type C4-dicarboxylate transport system, large permease component |
| ROS217_02050 |
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Gene: ROS217_02050: TRAP-type C4-dicarboxylate transport system, small permease component |
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Gene: SPOA0372: TRAP-type C4-dicarboxylate transport system, small permease component |
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TRAP-type C4-dicarboxylate transport system, small permease component |
| CRON 2. | ||||||||||||||||
| COG596 (MhpC) |
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Roseovarius sp. 217 Site: position = -233 score = 8.4344 sequence = CTGTCCCTTC-(12)-CTGTCTCTCG Gene: ROS217_02030: Epoxide hydrolase domain protein |
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Silicibacter pomeroyi DSS-3 Site: position = 16 score = 8.4344 sequence = CTGTCCCTTC-(12)-CTGTCTCTCG Gene: SPOA0376: Epoxide hydrolase domain protein |
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Epoxide hydrolase domain protein |
| COG1012 (PutA) |
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Gene: ROS217_02025: NAD-dependent Aldehyde dehydrogenase (EC 1.2.1.3) |
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Gene: SPOA0377: NAD-dependent Aldehyde dehydrogenase (EC 1.2.1.3) |
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NAD-dependent Aldehyde dehydrogenase (EC 1.2.1.3) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |