Regulog RPA0105 - Rhizobiales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
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| Phylum: | Proteobacteria/Alpha |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhizobiales
- By TF family - GntR/Others
| Genome | Genes | Operons |
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| Agrobacterium tumefaciens str. C58 (Cereon) | ||
| Azorhizobium caulinodans ORS 571 | ||
| Bartonella quintana str. Toulouse | ||
| Bradyrhizobium japonicum USDA 110 | ||
| Bradyrhizobium sp. BTAi1 | ||
| Brucella melitensis 16M | ||
| Mesorhizobium loti MAFF303099 | ||
| Mesorhizobium sp. BNC1 | ||
| Nitrobacter winogradskyi Nb-255 | ||
| Rhizobium etli CFN 42 | ||
| Rhizobium leguminosarum bv. viciae 3841 | ||
| Rhizobium sp. NGR234 | ||
| Rhodopseudomonas palustris CGA009 | 9 | 2 |
| Sinorhizobium meliloti 1021 | ||
| Xanthobacter autotrophicus Py2 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| betB |
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Rhodopseudomonas palustris CGA009 Site: position = -64 score = 7.48108 sequence = CTGGCCCAAT-(13)-CTGGACCTTC Gene: RPA0112: Betaine aldehyde dehydrogenase (EC 1.2.1.8) |
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Betaine aldehyde dehydrogenase (EC 1.2.1.8) |
| COG0730 |
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Gene: RPA0111: protein of unknown function DUF81 |
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protein of unknown function DUF81 |
| CRON 2. | ||||||||||||||||
| COG1574 |
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Rhodopseudomonas palustris CGA009 Site: position = -85 score = 9.33624 sequence = CTGGCTCCAT-(13)-CTGGCGCTAG Gene: RPA0104: Amidohydrolase |
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Amidohydrolase |
| COG0523 |
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Gene: RPA0103: Cobalamin synthesis protein/P47K |
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Cobalamin synthesis protein/P47K |
| oppA |
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Gene: RPA0102: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) |
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Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1) |
| oppB |
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Gene: RPA0101: Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) |
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Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) |
| oppC |
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Gene: RPA0100: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) |
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Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) |
| oppD |
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Gene: RPA0099: Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) |
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Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1) |
| oppF |
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Gene: RPA0098: Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) |
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Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |