Regulog GabR - Staphylococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | repressor (activator) |
| Biological process: | Gamma-aminobutyrate utilization |
| Effector: | Pyridoxal-5-phosphate; Gamma-aminobutyric acid |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By effector - Gamma-aminobutyric acid
- By pathway - Gamma-aminobutyrate utilization
| Genome | Genes | Operons |
|---|---|---|
| Macrococcus caseolyticus JCSC5402 | ||
| Staphylococcus aureus subsp. aureus N315 | ||
| Staphylococcus capitis SK14 | ||
| Staphylococcus carnosus subsp. carnosus TM300 | ||
| Staphylococcus epidermidis ATCC 12228 | ||
| Staphylococcus haemolyticus JCSC1435 | ||
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 3 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| gabT |
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Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -98 score = 11.7113 sequence = TACCAT-(13)-CTGGTA-(10)-GACCAA Gene: SSP0187: Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) |
| gabD |
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Gene: Sca_2374: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
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Gene: SH0214: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
Gene: SSP0188: Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) |
| gabP |
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Gene: SSP0189: Gamma-aminobutyrate permease |
Gamma-aminobutyrate permease |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |