Regulog YhdI/YdeL - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Metabolite transport |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - GntR/MocR
- By pathway - Metabolite transport
| Genome | Genes | Operons |
|---|---|---|
| Bacillus pumilus SAFR-032 | ||
| Bacillus licheniformis DSM 13 | 1 | 1 |
| Bacillus subtilis subsp. subtilis str. 168 | 2 | 2 |
| Bacillus amyloliquefaciens FZB42 | 1 | 1 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | 2 | 2 |
| Bacillus clausii KSM-K16 | ||
| Bacillus halodurans C-125 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| ydeK |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -136 score = 10.3202 sequence = ACTGGTAT-(16)-ACTGGCTG-(8)-AGGCCAAT Gene: BSU05230: Permease of the drug/metabolite transporter (DMT) superfamily |
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Bacillus amyloliquefaciens FZB42 Site: position = -111 score = 10.941 sequence = ACTGGCAT-(16)-ACTGGCCA-(8)-AGGCCAAT Gene: RBAM_005850: Permease of the drug/metabolite transporter (DMT) superfamily |
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Bacillus cereus ATCC 14579 Site: position = -116 score = 10.0839 sequence = TCTGACCC-(16)-TCTGATAC-(8)-GTACCAGA Gene: BC0582: Permease of the drug/metabolite transporter (DMT) superfamily |
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Permease of the drug/metabolite transporter (DMT) superfamily |
| CRON 2. | ||||||||||||
| yhdJ |
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Bacillus licheniformis DSM 13 Site: position = -88 score = 10.2576 sequence = TCTGGTAT-(16)-ACTGGTCA-(8)-AGCCCAGT Gene: BLi01017: Acetyltransferase (EC 2.3.1.-) |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -92 score = 9.72871 sequence = GCTGGCAT-(16)-ATTGGCTA-(8)-ATGCCATT Gene: BSU09490: Acetyltransferase (EC 2.3.1.-) |
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Gene: GK1498: Acetyltransferase (EC 2.3.1.-) |
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Bacillus cereus ATCC 14579 Site: position = -111 score = 10.9474 sequence = ACTGGCCT-(16)-ACTGCCAC-(8)-AGGGCAGT Gene: BC2069: Acetyltransferase (EC 2.3.1.-) |
Gene: ABC0852: Acetyltransferase (EC 2.3.1.-) |
Gene: BH1582: Acetyltransferase (EC 2.3.1.-) |
Gene: OB0311: Acetyltransferase (EC 2.3.1.-) |
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Acetyltransferase (EC 2.3.1.-) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |