Regulog MdcY - Moraxellaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:	Malonate metabolism
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

By taxonomy - Moraxellaceae
By TF family - GntR/Others
By pathway - Malonate metabolism

Statistics of regulated genes
Genome	Genes	Operons
Acinetobacter baumannii AB0057
Acinetobacter sp. ADP1
Psychrobacter arcticum 273-4	10	2
Psychrobacter sp. PRwf-1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
mdcL	Acinetobacter baumannii AB0057 Gene: AB57_1661: malonate transporter subunit	Acinetobacter sp. ADP1 Gene: ACIAD1760: malonate transporter subunit	* Psychrobacter arcticum 273-4 Site: position = -222 score = 5.17791 sequence = TTGTATACAA Gene: Psyc_1148: malonate transporter subunit	Psychrobacter sp. PRwf-1	malonate transporter subunit
mdcM	Acinetobacter baumannii AB0057 Gene: AB57_1662: Malonate transporter subunit	Acinetobacter sp. ADP1 Gene: ACIAD1761: Malonate transporter subunit	Psychrobacter arcticum 273-4 Gene: Psyc_1147: Malonate transporter subunit	Psychrobacter sp. PRwf-1	Malonate transporter subunit
mdcA	Acinetobacter baumannii AB0057 Gene: AB57_1654: Malonate decarboxylase alpha subunit	Acinetobacter sp. ADP1 Gene: ACIAD1753: Malonate decarboxylase alpha subunit	Psychrobacter arcticum 273-4 Gene: Psyc_1146: Malonate decarboxylase alpha subunit	Psychrobacter sp. PRwf-1	Malonate decarboxylase alpha subunit
mdcC	Acinetobacter baumannii AB0057 Gene: AB57_1656: Malonate decarboxylase, delta subunit	Acinetobacter sp. ADP1 Gene: ACIAD1755: Malonate decarboxylase, delta subunit	Psychrobacter arcticum 273-4 Gene: Psyc_1145: Malonate decarboxylase, delta subunit	Psychrobacter sp. PRwf-1	Malonate decarboxylase, delta subunit
mdcD	Acinetobacter baumannii AB0057 Gene: AB57_1657: Malonate decarboxylase beta subunit	Acinetobacter sp. ADP1 Gene: ACIAD1756: Malonate decarboxylase beta subunit	Psychrobacter arcticum 273-4 Gene: Psyc_1144: Malonate decarboxylase beta subunit	Psychrobacter sp. PRwf-1	Malonate decarboxylase beta subunit
mdcE	Acinetobacter baumannii AB0057 Gene: AB57_1658: Malonate decarboxylase gamma subunit	Acinetobacter sp. ADP1 Gene: ACIAD1757: Malonate decarboxylase gamma subunit	Psychrobacter arcticum 273-4 Gene: Psyc_1143: Malonate decarboxylase gamma subunit	Psychrobacter sp. PRwf-1	Malonate decarboxylase gamma subunit
mdcG	Acinetobacter baumannii AB0057 Gene: AB57_1659: holo-ACP synthase, malonate decarboxylase-specific	Acinetobacter sp. ADP1 Gene: ACIAD1758: holo-ACP synthase, malonate decarboxylase-specific	Psychrobacter arcticum 273-4 Gene: Psyc_1142: holo-ACP synthase, malonate decarboxylase-specific	Psychrobacter sp. PRwf-1	holo-ACP synthase, malonate decarboxylase-specific
mdcB	Acinetobacter baumannii AB0057 Gene: AB57_1655: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)	Acinetobacter sp. ADP1 Gene: ACIAD1754: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)	Psychrobacter arcticum 273-4 Gene: Psyc_1141: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)	Psychrobacter sp. PRwf-1	Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25)
mdcH	Acinetobacter baumannii AB0057 Gene: AB57_1660: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)	Acinetobacter sp. ADP1 Gene: ACIAD1759: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)	Psychrobacter arcticum 273-4 Gene: Psyc_1140: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)	Psychrobacter sp. PRwf-1	Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39)

CRON 2.
mdcY	Acinetobacter baumannii AB0057	Acinetobacter sp. ADP1	* Psychrobacter arcticum 273-4 Site: position = -21 score = 5.17791 sequence = TTGTATACAA Gene: Psyc_1149: Transcriptional regulator of malonate metabolism, GntR family	Psychrobacter sp. PRwf-1	Transcriptional regulator of malonate metabolism, GntR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog MdcY - Moraxellaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --