Regulog MlnR - Xanthomonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Malonate metabolism |
| Effector: | |
| Phylum: | Proteobacteria/Gamma |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Xanthomonadales
- By TF family - GntR/Others
- By pathway - Malonate metabolism
| Genome | Genes | Operons |
|---|---|---|
| Stenotrophomonas maltophilia K279a | 9 | 1 |
| Xanthomonas axonopodis pv. citri str. 306 | 6 | 1 |
| Xanthomonas campestris pv. campestris str. ATCC 33913 | 2 | 1 |
| Xylella fastidiosa 9a5c |
| Genes | Function | ||||
|---|---|---|---|---|---|
| CRON 1. | |||||
| mdcA |
*
Stenotrophomonas maltophilia K279a Site: position = -44 score = 6.49288 sequence = GTAATTATGTCGTAATTAC Gene: Smlt1232: Malonate decarboxylase alpha subunit |
*
Xanthomonas axonopodis pv. citri str. 306 Site: position = -55 score = 6.66756 sequence = ATAATTACGATGTAATTAC Site: position = -44 score = 5.12255 sequence = GTAATTACTTTGACATTAC Gene: XAC0560: Malonate decarboxylase alpha subunit |
*
Xanthomonas campestris pv. campestris str. ATCC 33913 Site: position = -56 score = 6.66756 sequence = ATAATTACGATGTAATTAC Site: position = -45 score = 5.2085 sequence = GTAATTACTTCGACATTAC Gene: XCC3609: Malonate decarboxylase alpha subunit |
|
Malonate decarboxylase alpha subunit |
| mdcC |
Gene: Smlt1231: Malonate decarboxylase delta subunit |
Gene: XAC0561: Malonate decarboxylase delta subunit |
Gene: XCC3610: Malonate decarboxylase delta subunit |
|
Malonate decarboxylase delta subunit |
| mdcD |
Gene: Smlt1230: Malonate decarboxylase beta subunit |
Gene: XAC0562: Malonate decarboxylase beta subunit |
Gene: XCC3611: Malonate decarboxylase beta subunit |
|
Malonate decarboxylase beta subunit |
| mdcE |
Gene: Smlt1229: malonate decarboxylase subunit, involved in the stability of the enzyme complex |
Gene: XAC0563: malonate decarboxylase subunit, involved in the stability of the enzyme complex |
Gene: XCC3612: malonate decarboxylase subunit, involved in the stability of the enzyme complex |
|
malonate decarboxylase subunit, involved in the stability of the enzyme complex |
| mdcG |
Gene: Smlt1228: malonate decarboxylase subunit, Holo-ACP synthase |
Gene: XAC0564: malonate decarboxylase subunit, Holo-ACP synthase |
Gene: XCC3613: malonate decarboxylase subunit, Holo-ACP synthase |
|
malonate decarboxylase subunit, Holo-ACP synthase |
| mdcB |
Gene: Smlt1227: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25) |
Gene: XAC0565: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25) |
Gene: XCC3614: Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25) |
|
Triphosphoribosyl-dephospho-CoA synthetase (EC 2.7.8.25) |
| mdcH |
Gene: Smlt1226: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: XAC0566: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39) |
Gene: XCC3615: Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39) |
|
Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39) |
| matC |
Gene: Smlt1225: malonate transporter |
Gene: XAC0567: malonate transporter |
Gene: XCC3616: malonate transporter |
|
malonate transporter |
| mlnR |
Gene: Smlt1224: Transcriptional regulator of malonate metabolism, GntR family |
Gene: XAC0568: Transcriptional regulator of malonate metabolism, GntR family |
Gene: XCC3617: Transcriptional regulator of malonate metabolism, GntR family |
|
Transcriptional regulator of malonate metabolism, GntR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |