Regulog Csal_1739 - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 5 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By TF family - GntR/Others

Statistics of regulated genes
Genome	Genes	Operons
Cellvibrio japonicus Ueda107
Marinomonas sp. MWYL1
Oceanobacter sp. RED65
Oceanospirillum sp. MED92
Reinekea sp. MED297
Hahella chejuensis KCTC 2396
Chromohalobacter salexigens DSM 3043	9	3
Alcanivorax borkumensis SK2
Marinobacter aqueolei
Marinobacter sp. ELB17
Teredinibacter turnerae T7901
Saccharophagus degradans 2-40

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
CJA_1138	Cellvibrio japonicus Ueda107 Gene: CJA_1138: 2-keto-3-deoxy-L-fuconate dehydrogenase	Marinomonas sp. MWYL1 Gene: Mmwyl1_0865: 2-keto-3-deoxy-L-fuconate dehydrogenase	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Hahella chejuensis KCTC 2396	* Chromohalobacter salexigens DSM 3043 Site: position = -85 score = 4.42497 sequence = GATGGCTCGACCATT Site: position = -73 score = 4.4258 sequence = ATTGGTCAGGCCTCT Gene: Csal_1738: 2-keto-3-deoxy-L-fuconate dehydrogenase	Alcanivorax borkumensis SK2	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	2-keto-3-deoxy-L-fuconate dehydrogenase
mhpD	Cellvibrio japonicus Ueda107	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Hahella chejuensis KCTC 2396	Chromohalobacter salexigens DSM 3043 Gene: Csal_1737: 2,4-diketo-3-deoxy-L-fuconate hydrolase	Alcanivorax borkumensis SK2	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	2,4-diketo-3-deoxy-L-fuconate hydrolase

CRON 2.
Csal_1739	Cellvibrio japonicus Ueda107	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Hahella chejuensis KCTC 2396	* Chromohalobacter salexigens DSM 3043 Site: position = -103 score = 4.4258 sequence = AGAGGCCTGACCAAT Site: position = -91 score = 4.42497 sequence = AATGGTCGAGCCATC Gene: Csal_1739: Transcriptional regulator, GntR family	Alcanivorax borkumensis SK2	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Transcriptional regulator, GntR family

CRON 3.
tdh	Cellvibrio japonicus Ueda107	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Hahella chejuensis KCTC 2396	* Chromohalobacter salexigens DSM 3043 Site: position = -79 score = 4.4258 sequence = ATTGGCCTGACCTCT Gene: Csal_1736: Alcohol dehydrogenase GroES-like protein	Alcanivorax borkumensis SK2	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Alcohol dehydrogenase GroES-like protein
uxaA	Cellvibrio japonicus Ueda107	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Hahella chejuensis KCTC 2396	Chromohalobacter salexigens DSM 3043 Gene: Csal_1735: Altronate hydrolase (EC 4.2.1.7)	Alcanivorax borkumensis SK2	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	Altronate hydrolase (EC 4.2.1.7)
mtlD	Cellvibrio japonicus Ueda107	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Hahella chejuensis KCTC 2396	Chromohalobacter salexigens DSM 3043 Gene: Csal_1734: D-mannonate oxidoreductase (EC 1.1.1.57)	Alcanivorax borkumensis SK2	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	D-mannonate oxidoreductase (EC 1.1.1.57)
Csal_1733	Cellvibrio japonicus Ueda107	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Hahella chejuensis KCTC 2396	Chromohalobacter salexigens DSM 3043 Gene: Csal_1733: TRAP transporter solute receptor, unknown substrate 8	Alcanivorax borkumensis SK2	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	TRAP transporter solute receptor, unknown substrate 8
Csal_1732	Cellvibrio japonicus Ueda107	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Hahella chejuensis KCTC 2396	Chromohalobacter salexigens DSM 3043 Gene: Csal_1732: TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 8	Alcanivorax borkumensis SK2	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 8
Csal_1731	Cellvibrio japonicus Ueda107	Marinomonas sp. MWYL1	Oceanobacter sp. RED65	Oceanospirillum sp. MED92	Reinekea sp. MED297	Hahella chejuensis KCTC 2396	Chromohalobacter salexigens DSM 3043 Gene: Csal_1731: TRAP dicarboxylate transporter, DctM subunit, unknown substrate 8	Alcanivorax borkumensis SK2	Marinobacter aqueolei	Marinobacter sp. ELB17	Teredinibacter turnerae T7901	Saccharophagus degradans 2-40	TRAP dicarboxylate transporter, DctM subunit, unknown substrate 8

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Csal_1739 - Oceanospirillales/Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --