Regulog Bcep18194_B0628 - Burkholderia

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/Others
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Burkholderia
By TF family - GntR/Others

Statistics of regulated genes
Genome	Genes	Operons
Burkholderia cepacia AMMD	9	1
Burkholderia glumae BGR1	5	1
Burkholderia mallei ATCC 23344
Burkholderia phymatum STM815
Burkholderia pseudomallei K96243
Burkholderia sp. 383	9	1
Burkholderia vietnamiensis G4	9	1
Burkholderia xenovorans LB400

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes									Function

CRON 1.
Bamb_4451	* Burkholderia cepacia AMMD Site: position = -67 score = 5.27692 sequence = ATTGGTTGGACCTTT Gene: Bamb_4451: 2-keto-3-deoxy-L-fuconate dehydrogenase	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	* Burkholderia sp. 383 Site: position = -69 score = 5.27692 sequence = ATTGGTTGGACCTTT Gene: Bcep18194_B0620: 2-keto-3-deoxy-L-fuconate dehydrogenase	* Burkholderia vietnamiensis G4 Site: position = -64 score = 5.27692 sequence = ATTGGTTGGACCTTT Gene: Bcep1808_3386: 2-keto-3-deoxy-L-fuconate dehydrogenase	Burkholderia xenovorans LB400	2-keto-3-deoxy-L-fuconate dehydrogenase
mhpD	Burkholderia cepacia AMMD Gene: Bamb_4450: 2,4-diketo-3-deoxy-L-fuconate hydrolase	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344 Gene: BMAA0643: 2,4-diketo-3-deoxy-L-fuconate hydrolase	Burkholderia phymatum STM815 Gene: Bphy_6717: 2,4-diketo-3-deoxy-L-fuconate hydrolase	Burkholderia pseudomallei K96243 Gene: BPSS0793: 2,4-diketo-3-deoxy-L-fuconate hydrolase	Burkholderia sp. 383 Gene: Bcep18194_B0621: 2,4-diketo-3-deoxy-L-fuconate hydrolase	Burkholderia vietnamiensis G4 Gene: Bcep1808_3385: 2,4-diketo-3-deoxy-L-fuconate hydrolase	Burkholderia xenovorans LB400	2,4-diketo-3-deoxy-L-fuconate hydrolase
COG4948	Burkholderia cepacia AMMD Gene: Bamb_4449: L-fuconate dehydratase (EC 4.2.1.68)	* Burkholderia glumae BGR1 Site: position = -114 score = 5.08048 sequence = ATTGGCTGGACCATT Gene: bglu_1g17990: L-fuconate dehydratase (EC 4.2.1.68)	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B0622: L-fuconate dehydratase (EC 4.2.1.68)	Burkholderia vietnamiensis G4 Gene: Bcep1808_3384: L-fuconate dehydratase (EC 4.2.1.68)	Burkholderia xenovorans LB400	L-fuconate dehydratase (EC 4.2.1.68)
Bamb_4448	Burkholderia cepacia AMMD Gene: Bamb_4448: 2-keto-3-deoxy-L-fuconate dehydrogenase	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B0623: 2-keto-3-deoxy-L-fuconate dehydrogenase	Burkholderia vietnamiensis G4 Gene: Bcep1808_3383: 2-keto-3-deoxy-L-fuconate dehydrogenase	Burkholderia xenovorans LB400	2-keto-3-deoxy-L-fuconate dehydrogenase
Bamb_4447	Burkholderia cepacia AMMD Gene: Bamb_4447: Possible fucose ABC transporter, ATP-binding component	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815 Gene: Bphy_5597: Possible fucose ABC transporter, ATP-binding component	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B0624: Possible fucose ABC transporter, ATP-binding component	Burkholderia vietnamiensis G4 Gene: Bcep1808_3382: Possible fucose ABC transporter, ATP-binding component	Burkholderia xenovorans LB400 Gene: Bxe_C1350: Possible fucose ABC transporter, ATP-binding component	Possible fucose ABC transporter, ATP-binding component
Bamb_4446	Burkholderia cepacia AMMD Gene: Bamb_4446: Possible fucose ABC transporter, permease component	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815 Gene: Bphy_5596: Possible fucose ABC transporter, permease component	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B0625: Possible fucose ABC transporter, permease component	Burkholderia vietnamiensis G4 Gene: Bcep1808_3381: Possible fucose ABC transporter, permease component	Burkholderia xenovorans LB400 Gene: Bxe_C1349: Possible fucose ABC transporter, permease component	Possible fucose ABC transporter, permease component
Bamb_4445	Burkholderia cepacia AMMD Gene: Bamb_4445: Possible fucose ABC transporter, substrate-binding component	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815 Gene: Bphy_5595: Possible fucose ABC transporter, substrate-binding component	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B0626: Possible fucose ABC transporter, substrate-binding component	Burkholderia vietnamiensis G4 Gene: Bcep1808_3380: Possible fucose ABC transporter, substrate-binding component	Burkholderia xenovorans LB400 Gene: Bxe_C1348: Possible fucose ABC transporter, substrate-binding component	Possible fucose ABC transporter, substrate-binding component
Bamb_4444	Burkholderia cepacia AMMD Gene: Bamb_4444: L-fuconolactone hydrolase	Burkholderia glumae BGR1	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B0627: L-fuconolactone hydrolase	Burkholderia vietnamiensis G4 Gene: Bcep1808_3379: L-fuconolactone hydrolase	Burkholderia xenovorans LB400	L-fuconolactone hydrolase
Bamb_4443	Burkholderia cepacia AMMD Gene: Bamb_4443: Transcriptional regulator, GntR family	Burkholderia glumae BGR1 Gene: bglu_1g17950: Transcriptional regulator, GntR family	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383 Gene: Bcep18194_B0628: Transcriptional regulator, GntR family	Burkholderia vietnamiensis G4 Gene: Bcep1808_3378: Transcriptional regulator, GntR family	Burkholderia xenovorans LB400	Transcriptional regulator, GntR family
bglu_1g17980	Burkholderia cepacia AMMD	Burkholderia glumae BGR1 Gene: bglu_1g17980: dehydrogenase clustered with L-fuconate utilization genes	Burkholderia mallei ATCC 23344 Gene: BMAA0644: dehydrogenase clustered with L-fuconate utilization genes	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243 Gene: BPSS0794: dehydrogenase clustered with L-fuconate utilization genes	Burkholderia sp. 383	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	dehydrogenase clustered with L-fuconate utilization genes
Bamb_1219	Burkholderia cepacia AMMD Gene: Bamb_1219: Possible alternative L-fucose mutarotase	Burkholderia glumae BGR1 Gene: bglu_1g17970: Possible alternative L-fucose mutarotase	Burkholderia mallei ATCC 23344 Gene: BMAA0645: Possible alternative L-fucose mutarotase	Burkholderia phymatum STM815 Gene: Bphy_6338: Possible alternative L-fucose mutarotase	Burkholderia pseudomallei K96243 Gene: BPSS0795: Possible alternative L-fucose mutarotase	Burkholderia sp. 383	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	Possible alternative L-fucose mutarotase
fucP	Burkholderia cepacia AMMD	Burkholderia glumae BGR1 Gene: bglu_1g17960: L-fucose transporter	Burkholderia mallei ATCC 23344	Burkholderia phymatum STM815	Burkholderia pseudomallei K96243	Burkholderia sp. 383	Burkholderia vietnamiensis G4	Burkholderia xenovorans LB400	L-fucose transporter

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Bcep18194_B0628 - Burkholderia

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --