Regulog Bcep18194_B0628 - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - GntR/Others
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia cepacia AMMD | 9 | 1 |
| Burkholderia glumae BGR1 | 5 | 1 |
| Burkholderia mallei ATCC 23344 | ||
| Burkholderia phymatum STM815 | ||
| Burkholderia pseudomallei K96243 | ||
| Burkholderia sp. 383 | 9 | 1 |
| Burkholderia vietnamiensis G4 | 9 | 1 |
| Burkholderia xenovorans LB400 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| Bamb_4451 |
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Burkholderia cepacia AMMD Site: position = -67 score = 5.27692 sequence = ATTGGTTGGACCTTT Gene: Bamb_4451: 2-keto-3-deoxy-L-fuconate dehydrogenase |
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Burkholderia sp. 383 Site: position = -69 score = 5.27692 sequence = ATTGGTTGGACCTTT Gene: Bcep18194_B0620: 2-keto-3-deoxy-L-fuconate dehydrogenase |
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Burkholderia vietnamiensis G4 Site: position = -64 score = 5.27692 sequence = ATTGGTTGGACCTTT Gene: Bcep1808_3386: 2-keto-3-deoxy-L-fuconate dehydrogenase |
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2-keto-3-deoxy-L-fuconate dehydrogenase |
| mhpD |
Gene: Bamb_4450: 2,4-diketo-3-deoxy-L-fuconate hydrolase |
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Gene: BMAA0643: 2,4-diketo-3-deoxy-L-fuconate hydrolase |
Gene: Bphy_6717: 2,4-diketo-3-deoxy-L-fuconate hydrolase |
Gene: BPSS0793: 2,4-diketo-3-deoxy-L-fuconate hydrolase |
Gene: Bcep18194_B0621: 2,4-diketo-3-deoxy-L-fuconate hydrolase |
Gene: Bcep1808_3385: 2,4-diketo-3-deoxy-L-fuconate hydrolase |
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2,4-diketo-3-deoxy-L-fuconate hydrolase |
| COG4948 |
Gene: Bamb_4449: L-fuconate dehydratase (EC 4.2.1.68) |
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Burkholderia glumae BGR1 Site: position = -114 score = 5.08048 sequence = ATTGGCTGGACCATT Gene: bglu_1g17990: L-fuconate dehydratase (EC 4.2.1.68) |
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Gene: Bcep18194_B0622: L-fuconate dehydratase (EC 4.2.1.68) |
Gene: Bcep1808_3384: L-fuconate dehydratase (EC 4.2.1.68) |
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L-fuconate dehydratase (EC 4.2.1.68) |
| Bamb_4448 |
Gene: Bamb_4448: 2-keto-3-deoxy-L-fuconate dehydrogenase |
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Gene: Bcep18194_B0623: 2-keto-3-deoxy-L-fuconate dehydrogenase |
Gene: Bcep1808_3383: 2-keto-3-deoxy-L-fuconate dehydrogenase |
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2-keto-3-deoxy-L-fuconate dehydrogenase |
| Bamb_4447 |
Gene: Bamb_4447: Possible fucose ABC transporter, ATP-binding component |
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Gene: Bphy_5597: Possible fucose ABC transporter, ATP-binding component |
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Gene: Bcep18194_B0624: Possible fucose ABC transporter, ATP-binding component |
Gene: Bcep1808_3382: Possible fucose ABC transporter, ATP-binding component |
Gene: Bxe_C1350: Possible fucose ABC transporter, ATP-binding component |
Possible fucose ABC transporter, ATP-binding component |
| Bamb_4446 |
Gene: Bamb_4446: Possible fucose ABC transporter, permease component |
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Gene: Bphy_5596: Possible fucose ABC transporter, permease component |
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Gene: Bcep18194_B0625: Possible fucose ABC transporter, permease component |
Gene: Bcep1808_3381: Possible fucose ABC transporter, permease component |
Gene: Bxe_C1349: Possible fucose ABC transporter, permease component |
Possible fucose ABC transporter, permease component |
| Bamb_4445 |
Gene: Bamb_4445: Possible fucose ABC transporter, substrate-binding component |
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Gene: Bphy_5595: Possible fucose ABC transporter, substrate-binding component |
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Gene: Bcep18194_B0626: Possible fucose ABC transporter, substrate-binding component |
Gene: Bcep1808_3380: Possible fucose ABC transporter, substrate-binding component |
Gene: Bxe_C1348: Possible fucose ABC transporter, substrate-binding component |
Possible fucose ABC transporter, substrate-binding component |
| Bamb_4444 |
Gene: Bamb_4444: L-fuconolactone hydrolase |
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Gene: Bcep18194_B0627: L-fuconolactone hydrolase |
Gene: Bcep1808_3379: L-fuconolactone hydrolase |
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L-fuconolactone hydrolase |
| Bamb_4443 |
Gene: Bamb_4443: Transcriptional regulator, GntR family |
Gene: bglu_1g17950: Transcriptional regulator, GntR family |
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Gene: Bcep18194_B0628: Transcriptional regulator, GntR family |
Gene: Bcep1808_3378: Transcriptional regulator, GntR family |
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Transcriptional regulator, GntR family |
| bglu_1g17980 |
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Gene: bglu_1g17980: dehydrogenase clustered with L-fuconate utilization genes |
Gene: BMAA0644: dehydrogenase clustered with L-fuconate utilization genes |
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Gene: BPSS0794: dehydrogenase clustered with L-fuconate utilization genes |
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dehydrogenase clustered with L-fuconate utilization genes |
| Bamb_1219 |
Gene: Bamb_1219: Possible alternative L-fucose mutarotase |
Gene: bglu_1g17970: Possible alternative L-fucose mutarotase |
Gene: BMAA0645: Possible alternative L-fucose mutarotase |
Gene: Bphy_6338: Possible alternative L-fucose mutarotase |
Gene: BPSS0795: Possible alternative L-fucose mutarotase |
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Possible alternative L-fucose mutarotase |
| fucP |
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Gene: bglu_1g17960: L-fucose transporter |
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L-fucose transporter |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |