Regulog UxuR3 - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | |
| Biological process: | Glucuronate utilization |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - GntR/Others
- By pathway - Glucuronate utilization
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia glumae BGR1 | ||
| Burkholderia mallei ATCC 23344 | ||
| Burkholderia cepacia AMMD | ||
| Burkholderia phymatum STM815 | ||
| Burkholderia pseudomallei K96243 | ||
| Burkholderia sp. 383 | 3 | 2 |
| Burkholderia vietnamiensis G4 | ||
| Burkholderia xenovorans LB400 |
| Genes | Function | ||||||||
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| CRON 1. | |||||||||
| uxuA |
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Burkholderia sp. 383 Site: position = -226 score = 5.12018 sequence = AAAATGGTACACCAATTC Site: position = -128 score = 5.2657 sequence = CAACTGGTAAACCACTAT Site: position = -104 score = 5.40303 sequence = CAACTGGCATACCAATCA Gene: Bcep18194_B1358: Mannonate dehydratase (EC 4.2.1.8) |
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Mannonate dehydratase (EC 4.2.1.8) |
| Sugar phosphate permease |
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Gene: Bphy_5154: Probable sugar transporter |
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Gene: Bcep18194_B1357: Probable sugar transporter |
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Probable sugar transporter |
| CRON 2. | |||||||||
| uxuR3 |
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Burkholderia sp. 383 Site: position = -165 score = 5.2657 sequence = ATAGTGGTTTACCAGTTG Site: position = -67 score = 5.12018 sequence = GAATTGGTGTACCATTTT Site: position = -189 score = 5.40303 sequence = TGATTGGTATGCCAGTTG Gene: Bcep18194_B1359: Predicted transcriptional regulator for glucuronate utilization, GntR family |
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Predicted transcriptional regulator for glucuronate utilization, GntR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |