Regulog PdxW - Desulfuromonadales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Proteobacteria/Delta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfuromonadales
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Geobacter lovleyi SZ | ||
| Geobacter sulfurreducens PCA | ||
| Geobacter uraniumreducens Rf4 | ||
| Geobacter metallireducens GS-15 | ||
| Geobacter sp. FRC-32 | ||
| Geobacter sp. M21 | 2 | 2 |
| Desulfuromonas acetoxidans DSM 684 | ||
| Pelobacter carbinolicus str. DSM 2380 | ||
| Pelobacter propionicus DSM 2379 |
| Genes | Function | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||
| pdxO |
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Geobacter sp. M21 Site: position = -124 score = 6.4712 sequence = ATCTGCACC-(32)-GGGGCAGCA Gene: GM21_0206: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
| CRON 2. | ||||||||||
| pdxW |
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Geobacter sp. M21 Site: position = -125 score = 6.4712 sequence = TGCTGCCCC-(32)-GGTGCAGAT Gene: GM21_0205: Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family |
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Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |