Regulog PdxW - Desulfuromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Delta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Geobacter lovleyi SZ
Geobacter sulfurreducens PCA
Geobacter uraniumreducens Rf4
Geobacter metallireducens GS-15
Geobacter sp. FRC-32
Geobacter sp. M21	2	2
Desulfuromonas acetoxidans DSM 684
Pelobacter carbinolicus str. DSM 2380
Pelobacter propionicus DSM 2379

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
pdxO	Geobacter lovleyi SZ	Geobacter sulfurreducens PCA	Geobacter uraniumreducens Rf4	Geobacter metallireducens GS-15	Geobacter sp. FRC-32	* Geobacter sp. M21 Site: position = -124 score = 6.4712 sequence = ATCTGCACC-(32)-GGGGCAGCA Gene: GM21_0206: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Desulfuromonas acetoxidans DSM 684	Pelobacter carbinolicus str. DSM 2380	Pelobacter propionicus DSM 2379	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

CRON 2.
pdxW	Geobacter lovleyi SZ	Geobacter sulfurreducens PCA	Geobacter uraniumreducens Rf4	Geobacter metallireducens GS-15	Geobacter sp. FRC-32	* Geobacter sp. M21 Site: position = -125 score = 6.4712 sequence = TGCTGCCCC-(32)-GGTGCAGAT Gene: GM21_0205: Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family	Desulfuromonas acetoxidans DSM 684	Pelobacter carbinolicus str. DSM 2380	Pelobacter propionicus DSM 2379	Predicted transcriptional regulator of pyridoxine metabolism, GntR/MocR family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --