Regulog PdxQ - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine/pyridoxal homeostasis |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - GntR/MocR
- By pathway - Pyridoxine/pyridoxal homeostasis
| Genome | Genes | Operons |
|---|---|---|
| Anoxybacillus flavithermus WK1 | ||
| Bacillus amyloliquefaciens FZB42 | 2 | 2 |
| Bacillus cereus ATCC 14579 | ||
| Bacillus clausii KSM-K16 | ||
| Bacillus halodurans C-125 | ||
| Bacillus licheniformis DSM 13 | ||
| Bacillus pumilus SAFR-032 | ||
| Bacillus subtilis subsp. subtilis str. 168 | ||
| Geobacillus kaustophilus HTA426 | 3 | 1 |
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 |
| Genes | Function | |||||||||||
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| CRON 1. | ||||||||||||
| pdxO2 |
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Bacillus amyloliquefaciens FZB42 Site: position = -104 score = 12.5169 sequence = CTGACAT-(16)-CTGTACC-(7)-ATGTCAG Gene: RBAM_005780: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Geobacillus kaustophilus HTA426 Site: position = -109 score = 12.0681 sequence = CTGACAT-(16)-TTGTCAC-(7)-ATGTCAG Gene: GK0739: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
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Pyridoxamine 5'-phosphate oxidase-related, FMN-binding |
| rhtB |
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Gene: GK0740: Threonine efflux protein |
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Threonine efflux protein |
| GOG3382 |
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Gene: GK0741: Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta |
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Solo B3/4 domain (OB-fold DNA/RNA-binding) of Phe-aaRS-beta |
| CRON 2. | ||||||||||||
| dapA |
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Bacillus amyloliquefaciens FZB42 Site: position = -101 score = 11.6323 sequence = CTGACAT-(16)-CTGTACC-(7)-ATGTCAT Gene: RBAM_005640: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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Gene: Pjdr2_3582: Dihydrodipicolinate synthase (EC 4.2.1.52) |
Dihydrodipicolinate synthase (EC 4.2.1.52) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |