Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog PdxQ - Desulfuromonadales

Properties
Regulator type: Transcription factor
Regulator family: GntR/MocR
Regulation mode:
Biological process: Pyridoxine/pyridoxal homeostasis
Effector: Pyridoxal-5-phosphate
Phylum: Proteobacteria/Delta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 1 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Desulfuromonas acetoxidans DSM 684 3 1
Geobacter lovleyi SZ
Geobacter metallireducens GS-15
Geobacter sp. FRC-32
Geobacter sp. M21
Geobacter sulfurreducens PCA
Geobacter uraniumreducens Rf4
Pelobacter carbinolicus str. DSM 2380
Pelobacter propionicus DSM 2379
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
pdxO
*
Desulfuromonas acetoxidans DSM 684

Site:
position = -123
score = 8.34182
sequence = TTGTCC-(18)-CTGGCA-(10)-TGATAA

Gene: Dace_1192: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
 
Geobacter lovleyi SZ
 
Geobacter metallireducens GS-15
 
Geobacter sp. FRC-32

Gene: Geob_0985: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
 
Geobacter sp. M21
 
Geobacter sulfurreducens PCA
 
Geobacter uraniumreducens Rf4
 
Pelobacter carbinolicus str. DSM 2380

Gene: Pcar_0166: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
 
Pelobacter propionicus DSM 2379
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding
PF01810
 
Desulfuromonas acetoxidans DSM 684

Gene: Dace_1193: transporter, LysE family
 
Geobacter lovleyi SZ

Gene: Glov_0086: transporter, LysE family
 
Geobacter metallireducens GS-15
 
Geobacter sp. FRC-32
 
Geobacter sp. M21
 
Geobacter sulfurreducens PCA

Gene: GSU1545: transporter, LysE family
 
Geobacter uraniumreducens Rf4
 
Pelobacter carbinolicus str. DSM 2380
 
Pelobacter propionicus DSM 2379

Gene: Ppro_1052: transporter, LysE family
transporter, LysE family
PF00583
 
Desulfuromonas acetoxidans DSM 684

Gene: Dace_1194: GCN5-related N-acetyltransferase
 
Geobacter lovleyi SZ
 
Geobacter metallireducens GS-15
 
Geobacter sp. FRC-32
 
Geobacter sp. M21
 
Geobacter sulfurreducens PCA
 
Geobacter uraniumreducens Rf4
 
Pelobacter carbinolicus str. DSM 2380
 
Pelobacter propionicus DSM 2379
GCN5-related N-acetyltransferase
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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