Regulog Veis_4721 - Comamonadaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Acidovorax avenae subsp. citrulli AAC00-1
Acidovorax sp. JS42
Comamonas testosteroni KF-1
Delftia acidovorans SPH-1
Leptothrix cholodnii SP-6
Methylibium petroleiphilum PM1
Polaromonas naphthalenivorans CJ2
Polaromonas sp. JS666
Rhodoferax ferrireducens DSM 15236
Variovorax paradoxus S110
Verminephrobacter eiseniae EF01-2	2	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes												Function

CRON 1.
potD	Acidovorax avenae subsp. citrulli AAC00-1	Acidovorax sp. JS42	Comamonas testosteroni KF-1	Delftia acidovorans SPH-1	Leptothrix cholodnii SP-6	Methylibium petroleiphilum PM1	Polaromonas naphthalenivorans CJ2	Polaromonas sp. JS666 Gene: Bpro_3886: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	Rhodoferax ferrireducens DSM 15236 Gene: Rfer_3222: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	Variovorax paradoxus S110	2 Verminephrobacter eiseniae EF01-2* Gene: Veis_4497: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) Site: position = -147 score = 11.0458 sequence = AAATGGACTG-(13)-AAATGGGTAT-(6)-CAAGCCACTG Gene: Veis_4498: ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)	ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --