Regulog Bpet3338 - Alcaligenaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Beta
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Bordetella avium 197N
Bordetella bronchiseptica RB50
Bordetella petrii DSM 12804	5	2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes				Function

CRON 1.
Bpet3338	Bordetella avium 197N	Bordetella bronchiseptica RB50	* Bordetella petrii DSM 12804 Site: position = -77 score = 9.23229 sequence = AGGTACAGT-(18)-ACTGTCCCA Gene: Bpet3338: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)	Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

CRON 2.
fcbT1	Bordetella avium 197N	Bordetella bronchiseptica RB50	* Bordetella petrii DSM 12804 Site: position = -133 score = 9.23229 sequence = TGGGACAGT-(18)-ACTGTACCT Gene: Bpet3339: TRAP transporter periplasmic mannitol-binding protein	TRAP transporter periplasmic mannitol-binding protein
fcbT2	Bordetella avium 197N	Bordetella bronchiseptica RB50	Bordetella petrii DSM 12804 Gene: Bpet3340: TRAP-type dicarboxylat transporter, small permease component	TRAP-type dicarboxylat transporter, small permease component
fcbT3	Bordetella avium 197N	Bordetella bronchiseptica RB50	Bordetella petrii DSM 12804 Gene: Bpet3341: TRAP-type dicarboxylat transporter, large component	TRAP-type dicarboxylat transporter, large component
mvaA	Bordetella avium 197N	Bordetella bronchiseptica RB50	Bordetella petrii DSM 12804 Gene: Bpet3342: 3-hydroxy-3-methylglutaryl-coenzyme A reductase	3-hydroxy-3-methylglutaryl-coenzyme A reductase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --