Regulog SPOA0164 - Rhodobacterales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Rhodobacterales
By TF family - GntR/MocR

Statistics of regulated genes
Genome	Genes	Operons
Hyphomonas neptunium ATCC 15444
Jannaschia sp. CCS1
Loktanella vestfoldensis SKA53
Oceanicaulis alexandrii HTCC2633
Oceanicola batsensis HTCC2597	5	2
Oceanicola granulosus HTCC2516
Paracoccus denitrificans PD1222
Rhodobacter sphaeroides 2.4.1
Rhodobacterales bacterium HTCC2654
Roseobacter sp. MED193
Roseovarius nubinhibens ISM
Roseovarius sp. 217
Silicibacter TM1040
Silicibacter pomeroyi DSS-3	5	2
Sulfitobacter sp. EE-36

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
SPOA0164	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	* Oceanicola batsensis HTCC2597 Site: position = -60 score = 8.90616 sequence = TGGTACAGT-(17)-TCTGTACCT Gene: OB2597_01522: Transcriptional regulator, GntR family	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	* Silicibacter pomeroyi DSS-3 Site: position = -70 score = 8.66597 sequence = AGTTACAGT-(18)-ACTGTACCC Gene: SPOA0164: Transcriptional regulator, GntR family	Sulfitobacter sp. EE-36	Transcriptional regulator, GntR family

CRON 2.
mvaA	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	* Oceanicola batsensis HTCC2597 Site: position = -86 score = 8.90616 sequence = AGGTACAGA-(17)-ACTGTACCA Gene: OB2597_01527: Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	* Silicibacter pomeroyi DSS-3 Site: position = -86 score = 8.66597 sequence = GGGTACAGT-(18)-ACTGTAACT Gene: SPOA0163: Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)	Sulfitobacter sp. EE-36	Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)
fcbT1	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597 Gene: OB2597_01532: TRAP-type C4-dicarboxylate transport system, periplasmic component	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3 Gene: SPOA0162: TRAP-type C4-dicarboxylate transport system, periplasmic component	Sulfitobacter sp. EE-36	TRAP-type C4-dicarboxylate transport system, periplasmic component
fcbT2	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597 Gene: OB2597_01537: TRAP-type C4-dicarboxylate transport system, small permease component	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3 Gene: SPOA0161: TRAP-type C4-dicarboxylate transport system, small permease component	Sulfitobacter sp. EE-36	TRAP-type C4-dicarboxylate transport system, small permease component
fcbT3	Hyphomonas neptunium ATCC 15444	Jannaschia sp. CCS1	Loktanella vestfoldensis SKA53	Oceanicaulis alexandrii HTCC2633	Oceanicola batsensis HTCC2597 Gene: OB2597_01542: TRAP-type C4-dicarboxylate transport system, large permease component	Oceanicola granulosus HTCC2516	Paracoccus denitrificans PD1222	Rhodobacter sphaeroides 2.4.1	Rhodobacterales bacterium HTCC2654	Roseobacter sp. MED193	Roseovarius nubinhibens ISM	Roseovarius sp. 217	Silicibacter TM1040	Silicibacter pomeroyi DSS-3 Gene: SPOA0160: TRAP-type C4-dicarboxylate transport system, large permease component	Sulfitobacter sp. EE-36	TRAP-type C4-dicarboxylate transport system, large permease component

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SPOA0164 - Rhodobacterales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --