Regulog SPOA0164 - Rhodobacterales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
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| Effector: | |
| Phylum: | Proteobacteria/Alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Hyphomonas neptunium ATCC 15444 | ||
| Jannaschia sp. CCS1 | ||
| Loktanella vestfoldensis SKA53 | ||
| Oceanicaulis alexandrii HTCC2633 | ||
| Oceanicola batsensis HTCC2597 | 5 | 2 |
| Oceanicola granulosus HTCC2516 | ||
| Paracoccus denitrificans PD1222 | ||
| Rhodobacter sphaeroides 2.4.1 | ||
| Rhodobacterales bacterium HTCC2654 | ||
| Roseobacter sp. MED193 | ||
| Roseovarius nubinhibens ISM | ||
| Roseovarius sp. 217 | ||
| Silicibacter TM1040 | ||
| Silicibacter pomeroyi DSS-3 | 5 | 2 |
| Sulfitobacter sp. EE-36 |
| Genes | Function | |||||||||||||||
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| CRON 1. | ||||||||||||||||
| SPOA0164 |
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Oceanicola batsensis HTCC2597 Site: position = -60 score = 8.90616 sequence = TGGTACAGT-(17)-TCTGTACCT Gene: OB2597_01522: Transcriptional regulator, GntR family |
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Silicibacter pomeroyi DSS-3 Site: position = -70 score = 8.66597 sequence = AGTTACAGT-(18)-ACTGTACCC Gene: SPOA0164: Transcriptional regulator, GntR family |
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Transcriptional regulator, GntR family |
| CRON 2. | ||||||||||||||||
| mvaA |
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Oceanicola batsensis HTCC2597 Site: position = -86 score = 8.90616 sequence = AGGTACAGA-(17)-ACTGTACCA Gene: OB2597_01527: Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) |
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Silicibacter pomeroyi DSS-3 Site: position = -86 score = 8.66597 sequence = GGGTACAGT-(18)-ACTGTAACT Gene: SPOA0163: Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) |
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Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) |
| fcbT1 |
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Gene: OB2597_01532: TRAP-type C4-dicarboxylate transport system, periplasmic component |
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Gene: SPOA0162: TRAP-type C4-dicarboxylate transport system, periplasmic component |
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TRAP-type C4-dicarboxylate transport system, periplasmic component |
| fcbT2 |
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Gene: OB2597_01537: TRAP-type C4-dicarboxylate transport system, small permease component |
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Gene: SPOA0161: TRAP-type C4-dicarboxylate transport system, small permease component |
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TRAP-type C4-dicarboxylate transport system, small permease component |
| fcbT3 |
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Gene: OB2597_01542: TRAP-type C4-dicarboxylate transport system, large permease component |
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Gene: SPOA0160: TRAP-type C4-dicarboxylate transport system, large permease component |
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TRAP-type C4-dicarboxylate transport system, large permease component |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |