Regulog PdxW - Oceanospirillales/Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine/pyridoxal homeostasis
Effector:	Pyridoxal-5-phosphate
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Alcanivorax borkumensis SK2
Chromohalobacter salexigens DSM 3043
Hahella chejuensis KCTC 2396
Marinomonas sp. MWYL1
Oceanobacter sp. RED65
Oceanospirillum sp. MED92	1	1
Reinekea sp. MED297
Marinobacter aqueolei	1	1
Marinobacter sp. ELB17
Saccharophagus degradans 2-40
Teredinibacter turnerae T7901
Cellvibrio japonicus Ueda107

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes													Function

CRON 1.
pdxO	Alcanivorax borkumensis SK2	Chromohalobacter salexigens DSM 3043	Hahella chejuensis KCTC 2396 Gene: HCH_01885: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Marinomonas sp. MWYL1 Gene: Mmwyl1_0086: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Oceanobacter sp. RED65	* Oceanospirillum sp. MED92 Site: position = -94 score = 12.0666 sequence = AACTGGGCCCAT-(12)-TATTGGATCTTT-(0)-TATAGACCTAAT Gene: MED92_15488: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Reinekea sp. MED297	* Marinobacter aqueolei Site: position = -101 score = 12.1167 sequence = CACTGGTCCTAT-(11)-ATCTGGGTCTTT-(2)-AGGGTATCAGAA Gene: Maqu_2952: Pyridoxamine 5'-phosphate oxidase-related, FMN-binding	Marinobacter sp. ELB17	Saccharophagus degradans 2-40	Teredinibacter turnerae T7901	Cellvibrio japonicus Ueda107	Pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --