Regulog Sbal_3352 - Shewanellaceae

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 6 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By TF family - GntR/MocR

Statistics of regulated genes
Genome	Genes	Operons
Shewanella amazonensis SB2B
Shewanella baltica OS155	2	2
Shewanella denitrificans OS217
Shewanella frigidimarina NCIMB 400
Shewanella halifaxensis HAW-EB4
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella pealeana ATCC 700345
Shewanella piezotolerans WP3
Shewanella putrefaciens CN-32	2	2
Shewanella sediminis HAW-EB3
Shewanella sp ANA-3
Shewanella sp MR-4
Shewanella sp MR-7
Shewanella sp W3-18-1	2	2
Shewanella woodyi ATCC 51908

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																	Function

CRON 1.
PF00583	Shewanella amazonensis SB2B	* Shewanella baltica OS155 Site: position = -110 score = 14.5644 sequence = ACTGGTACTG-(14)-AGTGTACCTT-(3)-TGGTACCGCA Gene: Sbal_3351: GCN5-related N-acetyltransferase (GNAT) domain	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4	Shewanella oneidensis MR-1	Shewanella pealeana ATCC 700345	Shewanella piezotolerans WP3	* Shewanella putrefaciens CN-32 Site: position = -111 score = 14.5368 sequence = ACTGGTACTG-(14)-AGTGTACCTT-(3)-CGGTACCACA Gene: Sputcn32_3002: GCN5-related N-acetyltransferase (GNAT) domain	Shewanella sediminis HAW-EB3	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	* Shewanella sp W3-18-1 Site: position = -111 score = 14.5368 sequence = ACTGGTACTG-(14)-AGTGTACCTT-(3)-CGGTACCACA Gene: Sputw3181_0947: GCN5-related N-acetyltransferase (GNAT) domain	Shewanella woodyi ATCC 51908	GCN5-related N-acetyltransferase (GNAT) domain

CRON 2.
Sbal_3352	Shewanella amazonensis SB2B	* Shewanella baltica OS155 Site: position = -54 score = 8.60848 sequence = TGCGGTACCA-(14)-TTTGTATTTT-(3)-CAGTACCAGT Gene: Sbal_3352: Transcriptional regulator, GntR famil?	Shewanella denitrificans OS217	Shewanella frigidimarina NCIMB 400	Shewanella halifaxensis HAW-EB4	Shewanella loihica PV-4	Shewanella oneidensis MR-1	Shewanella pealeana ATCC 700345	Shewanella piezotolerans WP3	* Shewanella putrefaciens CN-32 Site: position = -53 score = 10.0764 sequence = TGTGGTACCG-(14)-TTTGTATTTT-(3)-CAGTACCAGT Gene: Sputcn32_3003: Transcriptional regulator, GntR famil?	Shewanella sediminis HAW-EB3	Shewanella sp ANA-3	Shewanella sp MR-4	Shewanella sp MR-7	* Shewanella sp W3-18-1 Site: position = -53 score = 9.32455 sequence = TGTGGTACCG-(14)-TTTGCATTTT-(3)-CAGTACCAGT Gene: Sputw3181_0946: Transcriptional regulator, GntR famil?	Shewanella woodyi ATCC 51908	Transcriptional regulator, GntR famil?

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Sbal_3352 - Shewanellaceae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --