Regulog Bcep1808_4966 - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
|
Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia cepacia AMMD | ||
| Burkholderia glumae BGR1 | ||
| Burkholderia mallei ATCC 23344 | ||
| Burkholderia phymatum STM815 | 1 | 1 |
| Burkholderia pseudomallei K96243 | ||
| Burkholderia sp. 383 | ||
| Burkholderia vietnamiensis G4 | 1 | 1 |
| Burkholderia xenovorans LB400 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| PF11142 |
Gene: Bamb_2583: Protein of unknown function DUF2917 |
|
|
*
Burkholderia phymatum STM815 Site: position = -119 score = 19.393 sequence = AACTGTCAGG-(8)-CTGCACAGTT-(7)-AACTGTTCAG-(0)-TACTGTGCAT Gene: Bphy_0549: Protein of unknown function DUF2917 |
|
|
|
|
Protein of unknown function DUF2917 |
| CRON 2. | |||||||||
| PF01810 |
|
Gene: bglu_2g22270: Lysine-type exporter protein (LYSE/YGGA) |
|
|
|
|
*
Burkholderia vietnamiensis G4 Site: position = -490 score = 16.7808 sequence = AAGTGTTCGG-(8)-GCGAACACTT-(7)-GATTGTTCGG-(0)-TTGTGTTCAT Gene: Bcep1808_4965: Lysine-type exporter protein (LYSE/YGGA) |
|
Lysine-type exporter protein (LYSE/YGGA) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |