Regulog CPS_3393 - Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Metabolite transport
Effector:
Phylum:	Proteobacteria/Gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 1 sites [see more]

Member of regulog collections

Statistics of regulated genes
Genome	Genes	Operons
Alteromonadales bacterium TW-7
Alteromonas macleodii 'Deep ecotype'
Colwellia psychrerythraea 34H	2	1
Idiomarina baltica OS145
Idiomarina loihiensis L2TR
Pseudoalteromonas tunicata D2
Pseudoalteromonas haloplanktis TAC125
Pseudoalteromonas atlantica T6c
Glaciecola sp. HTCC2999

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
PF00892	Alteromonadales bacterium TW-7	Alteromonas macleodii 'Deep ecotype'	* Colwellia psychrerythraea 34H Site: position = -127 score = 8.90472 sequence = AACTGTACCCT-(19)-ATCTGTTCTCT Gene: CPS_3391: Permease of the drug/metabolite transporter (DMT) superfamily	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas tunicata D2	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas atlantica T6c	Glaciecola sp. HTCC2999	Permease of the drug/metabolite transporter (DMT) superfamily
CPS_3390	Alteromonadales bacterium TW-7	Alteromonas macleodii 'Deep ecotype'	Colwellia psychrerythraea 34H Gene: CPS_3390: Aspartate aminotransferase (EC 2.6.1.1)	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas tunicata D2	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas atlantica T6c	Glaciecola sp. HTCC2999	Aspartate aminotransferase (EC 2.6.1.1)

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --