Regulog BAV2320 - Alcaligenaceae
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Alcaligenaceae
- By TF family - GntR/MocR
| Genome | Genes | Operons |
|---|---|---|
| Bordetella avium 197N | 3 | 3 |
| Bordetella bronchiseptica RB50 | 1 | 1 |
| Bordetella petrii DSM 12804 | 2 | 2 |
| Genes | Function | |||
|---|---|---|---|---|
| CRON 1. | ||||
| BAV2320 |
*
Bordetella avium 197N Site: position = -119 score = 14.7825 sequence = ACAGTCACACGCCA-(11)-GACACAACAGACGG-(8)-CGTTCTGTTATGGT-(11)-TAGCCTGTGTCTGT Gene: BAV2320: Transcriptional regulator, GntR family |
Gene: BB2054: Transcriptional regulator, GntR family |
*
Bordetella petrii DSM 12804 Site: position = -119 score = 14.1538 sequence = ACAGACACACCGTT-(11)-ACCGCAACAGACAA-(8)-TCATCTGTTATGGT-(11)-AGAACTGTGCCTTA Gene: Bpet2044: Transcriptional regulator, GntR family |
Transcriptional regulator, GntR family |
| CRON 2. | ||||
| BAV2319 |
*
Bordetella avium 197N Site: position = -118 score = 18.264 sequence = ACAGACACAGGCTA-(11)-ACCATAACAGAACG-(8)-CCGTCTGTTGTGTC-(11)-TGGCGTGTGACTGT Gene: BAV2319: hypothetical protein |
|
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hypothetical protein |
| CRON 3. | ||||
| BAV2318 |
*
Bordetella avium 197N Site: position = -683 score = 18.264 sequence = ACAGACACAGGCTA-(11)-ACCATAACAGAACG-(8)-CCGTCTGTTGTGTC-(11)-TGGCGTGTGACTGT Gene: BAV2318: hypothetical protein |
*
Bordetella bronchiseptica RB50 Site: position = -732 score = 19.4059 sequence = ACAGGCACAGTTGT-(11)-ACCATAACAGAGTT-(8)-AGATCTGTATCGAT-(11)-GTTGCTGTGCCTGT Gene: BB2055: hypothetical protein |
*
Bordetella petrii DSM 12804 Site: position = -666 score = 18.0994 sequence = TAAGGCACAGTTCT-(11)-ACCATAACAGATGA-(8)-TTGTCTGTTGCGGT-(11)-AACGGTGTGTCTGT Gene: Bpet2046: hypothetical protein |
hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |