Regulog H16_A0970 - Ralstonia
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | |
| Effector: | |
| Phylum: | Proteobacteria/Beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
| Genome | Genes | Operons |
|---|---|---|
| Cupriavidus taiwanensis | 2 | 2 |
| Ralstonia eutropha H16 | 3 | 3 |
| Ralstonia eutropha JMP134 | 2 | 2 |
| Ralstonia metallidurans CH34 | 1 | 1 |
| Ralstonia pickettii 12J | 1 | 1 |
| Ralstonia solanacearum GMI1000 | 1 | 1 |
| Genes | Function | ||||||
|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||
| h16_A0971 |
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Cupriavidus taiwanensis Site: position = -142 score = 19.8873 sequence = ACAGATACAGAGGC-(11)-ATCGTAACAGGCGG-(8)-GTTGCTGTTCCGGT-(11)-GGCCGTGTGCCTGC Gene: RALTA_A0964: hypothetical protein |
*
Ralstonia eutropha H16 Site: position = -143 score = 20.04 sequence = ACAGATACAGAAGC-(11)-ATCGTAACAGGGCT-(8)-ATGGCTGTTCCGGT-(11)-CGCGGTGTGCCTGC Gene: H16_A0971: hypothetical protein |
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hypothetical protein |
| CRON 2. | |||||||
| RSc0598 |
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*
Ralstonia pickettii 12J Site: position = -136 score = 19.4648 sequence = ACAGATACAGACGA-(11)-ACCGCAACAGATTG-(10)-ATGCCTGTTGCGCC-(10)-AGTTCTGTGTCTGT Gene: Rpic_0527: hypothetical protein |
*
Ralstonia solanacearum GMI1000 Site: position = -137 score = 20.4905 sequence = ACAGATACAGACGG-(11)-ACCGTAACAGATGA-(10)-TGCCCTGCTCTGGT-(10)-ACGTCTGTGTCTGT Gene: RS04847: hypothetical protein |
hypothetical protein |
| CRON 3. | |||||||
| h16_A0972 |
*
Cupriavidus taiwanensis Site: position = -581 score = 19.8873 sequence = ACAGATACAGAGGC-(11)-ATCGTAACAGGCGG-(8)-GTTGCTGTTCCGGT-(11)-GGCCGTGTGCCTGC Gene: RALTA_A0965: putative FAD dependent oxidoreductase |
*
Ralstonia eutropha H16 Site: position = -582 score = 20.04 sequence = ACAGATACAGAAGC-(11)-ATCGTAACAGGGCT-(8)-ATGGCTGTTCCGGT-(11)-CGCGGTGTGCCTGC Gene: H16_A0972: putative FAD dependent oxidoreductase |
*
Ralstonia eutropha JMP134 Site: position = -631 score = 20.5357 sequence = ACAGATACAGACGG-(11)-ATCGTAACAGACAG-(8)-TGCACTGTTCCGGT-(11)-TCTGTTGTGGCTGT Gene: Reut_A2459: putative FAD dependent oxidoreductase |
*
Ralstonia metallidurans CH34 Site: position = -549 score = 20.5699 sequence = ACAGATACAGATGC-(11)-ATCGTAACAGGGCG-(8)-ACATCTGTTCTGGT-(11)-TGGCTTGTGCCTGT Gene: Rmet_0869: putative FAD dependent oxidoreductase |
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putative FAD dependent oxidoreductase |
| CRON 4. | |||||||
| H16_A0970 |
Gene: RALTA_A0963: Transcriptional regulator, GntR family |
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Ralstonia eutropha H16 Site: position = -119 score = 14.3191 sequence = GCAGGCACACCGCG-(11)-ACCGGAACAGCCAT-(8)-AGCCCTGTTACGAT-(11)-GCTTCTGTATCTGT Gene: H16_A0970: Transcriptional regulator, GntR family |
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Ralstonia eutropha JMP134 Site: position = -118 score = 15.5715 sequence = ACAGCCACAACAGA-(11)-ACCGGAACAGTGCA-(8)-CTGTCTGTTACGAT-(11)-CCGTCTGTATCTGT Gene: Reut_A2460: Transcriptional regulator, GntR family |
Gene: Rmet_0868: Transcriptional regulator, GntR family |
Gene: Rpic_0528: Transcriptional regulator, GntR family |
Gene: RS04846: Transcriptional regulator, GntR family |
Transcriptional regulator, GntR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |